STRINGSTRING
SMD44_02387 SMD44_02387 SMD44_01420 SMD44_01420 nirB nirB nasB nasB SMD44_07744 SMD44_07744 SMD44_06637 SMD44_06637 SMD44_01160 SMD44_01160 SMD44_05518 SMD44_05518 SMD44_02312 SMD44_02312 SMD44_02743 SMD44_02743
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMD44_02387Unannotated protein. (462 aa)
SMD44_01420Unannotated protein. (466 aa)
nirBUnannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (861 aa)
nasBUnannotated protein. (409 aa)
SMD44_07744Unannotated protein. (480 aa)
SMD44_06637Unannotated protein. (461 aa)
SMD44_01160Unannotated protein. (467 aa)
SMD44_05518Unannotated protein. (482 aa)
SMD44_02312Unannotated protein. (400 aa)
SMD44_02743Unannotated protein. (420 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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