STRINGSTRING
vdh vdh SMD44_00423 SMD44_00423 SMD44_03272 SMD44_03272 aroE aroE SMD44_07332 SMD44_07332 folD folD SMD44_05846 SMD44_05846 SMD44_03335 SMD44_03335
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vdhUnannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (360 aa)
SMD44_00423Unannotated protein. (341 aa)
SMD44_03272Unannotated protein. (476 aa)
aroEUnannotated protein; Belongs to the shikimate dehydrogenase family. (276 aa)
SMD44_07332Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (417 aa)
folDUnannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (286 aa)
SMD44_05846Unannotated protein. (404 aa)
SMD44_03335Unannotated protein. (1675 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.