STRINGSTRING
SMD44_08075 SMD44_08075 SMD44_01112 SMD44_01112 SMD44_00188 SMD44_00188 SMD44_08724 SMD44_08724 dhbF dhbF GCA_000716675_07610 GCA_000716675_07610 SMD44_07460 SMD44_07460 SMD44_01490 SMD44_01490 GCA_000716675_03635 GCA_000716675_03635 SMD44_08033 SMD44_08033 SMD44_08038 SMD44_08038 SMD44_08040 SMD44_08040
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMD44_08075Unannotated protein. (450 aa)
SMD44_01112Unannotated protein. (264 aa)
SMD44_00188Unannotated protein. (267 aa)
SMD44_08724Unannotated protein. (934 aa)
dhbFUnannotated protein. (2444 aa)
GCA_000716675_07610Unannotated protein. (260 aa)
SMD44_07460Unannotated protein. (283 aa)
SMD44_01490Unannotated protein. (1567 aa)
GCA_000716675_03635Unannotated protein. (5848 aa)
SMD44_08033Unannotated protein. (342 aa)
SMD44_08038Unannotated protein. (4896 aa)
SMD44_08040Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family. (3187 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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