STRINGSTRING
fabF-3 fabF-3 SMD44_08692 SMD44_08692 SMD44_08694 SMD44_08694 SMD44_00406 SMD44_00406 SMD44_00405 SMD44_00405 SMD44_00399 SMD44_00399 SMD44_06554 SMD44_06554 SMD44_08040 SMD44_08040 GCA_000716675_01932 GCA_000716675_01932 fabF fabF SMD44_07474 SMD44_07474 fabF-2 fabF-2 SMD44_00097 SMD44_00097
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fabF-3Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (446 aa)
SMD44_08692Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (428 aa)
SMD44_08694Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (379 aa)
SMD44_00406Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (439 aa)
SMD44_00405Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)
SMD44_00399Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (441 aa)
SMD44_06554Unannotated protein. (920 aa)
SMD44_08040Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family. (3187 aa)
GCA_000716675_01932Unannotated protein. (1129 aa)
fabFUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (420 aa)
SMD44_07474Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (981 aa)
fabF-2Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)
SMD44_00097Unannotated protein. (3631 aa)
Your Current Organism:
Streptomyces alboflavus
NCBI taxonomy Id: 67267
Other names: ATCC 12626, ATCC 23874, Actinomyces alboflavus, BCRC 13664, CBS 613.68, CCRC 13664, CCRC:13664, CIP 104427, DSM 40045, IFO 13196, IMET 42936, ISP 5045, JCM 4615, KCTC 9674, NBRC 13196, NRRL B-2373, NRRL-ISP 5045, S. alboflavus, Streptomyces albiflavus, VKM Ac-972
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