(145 nodes) Mixed, incl. Transmembrane, and Tetratricopeptide-like helical domain superfamily network (Streptomyces prasinopilosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SAMN05216505_1011131	Uncharacterized protein. (223 aa)
	SAMN05216505_1011168	Transglycosylase SLT domain-containing protein. (252 aa)
	orn	Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. (200 aa)
	SAMN05216505_101190	annotation not available (428 aa)
	SAMN05216505_101191	Nucleotide-binding universal stress protein, UspA family. (180 aa)
	SAMN05216505_101208	Phosphatase. (262 aa)
	SAMN05216505_101209	PucR C-terminal helix-turn-helix domain-containing protein. (540 aa)
	SAMN05216505_101281	LPXTG-motif cell wall anchor domain-containing protein. (307 aa)
	SAMN05216505_101308	TQXA domain-containing protein. (448 aa)
	SAMN05216505_101360	Uncharacterized protein. (353 aa)
	SAMN05216505_101382	Uncharacterized protein. (311 aa)
	SAMN05216505_101415	Zn-dependent protease with chaperone function. (379 aa)
	SAMN05216505_101416	Uncharacterized protein. (54 aa)
	SAMN05216505_101418	Transcriptional attenuator, LytR family. (652 aa)
	SAMN05216505_101420	Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. (223 aa)
	SAMN05216505_101422	Uncharacterized protein. (57 aa)
	SAMN05216505_101423	Uncharacterized protein. (77 aa)
	SAMN05216505_101636	Uncharacterized protein. (489 aa)
	SAMN05216505_101680	Endonuclease, Uma2 family (Restriction endonuclease fold). (192 aa)
	SAMN05216505_101703	Uncharacterized protein. (59 aa)
	SAMN05216505_101704	Transcriptional regulator, TetR family. (226 aa)
	SAMN05216505_101705	Bifunctional DNA primase/polymerase, N-terminal. (246 aa)
	SAMN05216505_101706	Uncharacterized protein. (349 aa)
	map	Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (285 aa)
	SAMN05216505_101721	Uncharacterized protein. (79 aa)
	SAMN05216505_101722	Uncharacterized protein. (200 aa)
	SAMN05216505_101723	Reduced coenzyme F420:NADP oxidoreductase. (244 aa)
	SAMN05216505_101724	Uncharacterized protein. (70 aa)
	SAMN05216505_101805	Uncharacterized protein. (95 aa)
	SAMN05216505_101812	Uncharacterized protein. (736 aa)
	SAMN05216505_101813	Uncharacterized protein. (69 aa)
	SAMN05216505_101907	Uncharacterized protein. (54 aa)
	SAMN05216505_101908	NYN domain-containing protein. (403 aa)
	SAMN05216505_101909	ABC-2 type transport system ATP-binding protein. (339 aa)
	SAMN05216505_101910	ABC-2 type transport system permease protein. (307 aa)
	SAMN05216505_101911	Uncharacterized protein. (192 aa)
	SAMN05216505_102206	Uncharacterized protein. (163 aa)
	SAMN05216505_102207	Protein phosphatase 2C. (473 aa)
	SAMN05216505_1032	annotation not available (150 aa)
	SAMN05216505_103283	Putative peptidoglycan binding domain-containing protein. (315 aa)
	SAMN05216505_1033	Uncharacterized protein. (948 aa)
	SAMN05216505_103323	Uncharacterized protein. (220 aa)
	SAMN05216505_103325	Uncharacterized protein. (206 aa)
	SAMN05216505_1034	TAP-like protein. (490 aa)
	SAMN05216505_103406	Uncharacterized protein. (296 aa)
	SAMN05216505_103526	Peptidase family M48. (312 aa)
	SAMN05216505_10355	Uncharacterized protein. (766 aa)
	SAMN05216505_10410	Uncharacterized protein. (444 aa)
	SAMN05216505_10411	Uncharacterized protein. (274 aa)
	SAMN05216505_104115	Uncharacterized membrane protein YphA, DoxX/SURF4 family. (579 aa)
	SAMN05216505_10412	Uncharacterized protein. (102 aa)
	SAMN05216505_10414	Transglycosylase SLT domain-containing protein. (347 aa)
	SAMN05216505_10416	Uncharacterized protein. (294 aa)
	SAMN05216505_104232	Bifunctional DNA primase/polymerase, N-terminal. (232 aa)
	SAMN05216505_104233	Transcriptional regulator. (461 aa)
	SAMN05216505_104243	Putative flavoprotein involved in K+ transport. (408 aa)
	SAMN05216505_104245	Pyridoxamine 5'-phosphate oxidase. (141 aa)
	SAMN05216505_104246	Transcriptional regulator, TetR family. (215 aa)
	SAMN05216505_104247	Uncharacterized protein. (261 aa)
	SAMN05216505_104331	Ribosomal-protein-alanine N-acetyltransferase. (216 aa)
	SAMN05216505_104332	Uncharacterized protein. (443 aa)
	SAMN05216505_104397	SUKH-3 immunity protein. (177 aa)
	SAMN05216505_104398	YwqJ-like deaminase. (172 aa)
	SAMN05216505_104399	SMI1 / KNR4 family (SUKH-1). (328 aa)
	SAMN05216505_104400	Xanthomonas XOO_2897-like deaminase. (820 aa)
	SAMN05216505_104434	Uncharacterized protein. (77 aa)
	SAMN05216505_104435	Uncharacterized protein. (93 aa)
	SAMN05216505_104440	Uncharacterized protein. (155 aa)
	SAMN05216505_104441	Transcriptional regulator, RpiR family. (281 aa)
	SAMN05216505_104442	Uncharacterized protein. (196 aa)
	SAMN05216505_104481	Glycosyltransferase, GT2 family. (1240 aa)
	SAMN05216505_104482	Uncharacterized protein. (528 aa)
	SAMN05216505_1047	Uncharacterized protein. (525 aa)
	SAMN05216505_1048	AAA-like domain-containing protein. (470 aa)
	SAMN05216505_1049	Uncharacterized protein. (519 aa)
	SAMN05216505_105111	DUF397 domain-containing protein. (74 aa)
	SAMN05216505_105112	Helix-turn-helix domain-containing protein. (286 aa)
	SAMN05216505_105113	Histidine kinase-like ATPase domain-containing protein. (164 aa)
	SAMN05216505_105196	Fusaric acid resistance protein-like. (496 aa)
	SAMN05216505_105198	Uncharacterized protein. (277 aa)
	SAMN05216505_105208	Peptidase family M48. (311 aa)
	SAMN05216505_105344	Alanine racemase. (361 aa)
	SAMN05216505_105354	Uncharacterized protein. (497 aa)
	SAMN05216505_106246	Uncharacterized protein. (238 aa)
	SAMN05216505_10664	Restriction endonuclease. (274 aa)
	SAMN05216505_107100	Transcriptional regulator. (446 aa)
	SAMN05216505_107110	SseB protein N-terminal domain-containing protein. (259 aa)
	SAMN05216505_107175	Uncharacterized protein. (228 aa)
	SAMN05216505_107176	Uncharacterized protein. (62 aa)
	SAMN05216505_107230	MFS transporter, DHA2 family, multidrug resistance protein. (551 aa)
	SAMN05216505_107231	Dolichyl-phosphate-mannose-protein mannosyltransferase. (431 aa)
	SAMN05216505_107232	Membrane-associated phospholipid phosphatase. (359 aa)
	SAMN05216505_10725	Uncharacterized protein. (57 aa)
	SAMN05216505_107252	Tetratricopeptide (TPR) repeat. (685 aa)
	SAMN05216505_107253	ADP-ribose pyrophosphatase. (211 aa)
	pyrG	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (548 aa)
	SAMN05216505_10726	Uncharacterized protein. (152 aa)
	SAMN05216505_10727	Thioredoxin. (174 aa)
	SAMN05216505_10799	ADP-ribose pyrophosphatase YjhB, NUDIX family. (181 aa)
	SAMN05216505_108108	Uncharacterized protein. (352 aa)
	SAMN05216505_10844	Uncharacterized protein. (406 aa)
	SAMN05216505_10855	Uncharacterized protein. (124 aa)
	SAMN05216505_10856	Uncharacterized protein. (215 aa)
	SAMN05216505_10858	Uncharacterized protein. (577 aa)
	SAMN05216505_10859	8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. (252 aa)
	SAMN05216505_10860	ABC-type multidrug transport system, ATPase component. (648 aa)
	SAMN05216505_10861	DNA-binding transcriptional regulator, FadR family. (310 aa)
	SAMN05216505_10916	Putative sensory transduction regulator. (176 aa)
	SAMN05216505_109164	Uncharacterized protein. (489 aa)
	SAMN05216505_109196	Uncharacterized protein. (608 aa)
	SAMN05216505_10942	Diacylglycerol kinase catalytic domain-containing protein. (294 aa)
	SAMN05216505_10964	Predicted transcriptional regulator. (129 aa)
	SAMN05216505_10965	Peptidase family M48. (311 aa)
	SAMN05216505_10970	Uncharacterized protein. (351 aa)
	SAMN05216505_110162	ATP synthase protein I. (149 aa)
	SAMN05216505_110190	Uncharacterized protein. (311 aa)
	SAMN05216505_110191	Chromosome segregation ATPase. (1283 aa)
	SAMN05216505_11041	Uncharacterized protein. (326 aa)
	SAMN05216505_11056	Diacylglycerol kinase family enzyme. (322 aa)
	SAMN05216505_11057	Uncharacterized protein. (169 aa)
	SAMN05216505_111103	Bifunctional DNA primase/polymerase, N-terminal. (221 aa)
	SAMN05216505_111136	LytR cell envelope-related transcriptional attenuator. (214 aa)
	SAMN05216505_111137	Transcription regulator of the Arc/MetJ class. (98 aa)
	SAMN05216505_111163	Helix-turn-helix domain-containing protein. (506 aa)
	SAMN05216505_11134	Uncharacterized protein. (809 aa)
	SAMN05216505_11142	Alanine racemase, N-terminal domain. (343 aa)
	SAMN05216505_11143	Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme). (373 aa)
	SAMN05216505_113113	L,D-peptidoglycan transpeptidase YkuD, ErfK/YbiS/YcfS/YnhG family. (301 aa)
	SAMN05216505_114107	Uncharacterized protein. (315 aa)
	SAMN05216505_114148	Vitamin K-dependent gamma-carboxylase. (481 aa)
	SAMN05216505_114149	Uncharacterized protein. (303 aa)
	SAMN05216505_11426	Vitamin K-dependent gamma-carboxylase. (375 aa)
	SAMN05216505_11427	Uncharacterized protein. (194 aa)
	SAMN05216505_1147	Asparagine synthase. (706 aa)
	SAMN05216505_115109	Uncharacterized protein. (254 aa)
	SAMN05216505_115110	Uncharacterized protein. (74 aa)
	SAMN05216505_11970	Uncharacterized protein. (177 aa)
	SAMN05216505_12068	Uncharacterized protein. (449 aa)
	SAMN05216505_12122	Transcriptional regulator, TetR family. (179 aa)
	SAMN05216505_12139	Mycolic acid cyclopropane synthetase. (269 aa)
	SAMN05216505_12144	Uncharacterized protein. (497 aa)
	SAMN05216505_12145	Bifunctional DNA primase/polymerase, N-terminal. (223 aa)
	SAMN05216505_12165	AsnC family protein. (77 aa)
	SAMN05216505_12166	Uncharacterized protein. (164 aa)
	SAMN05216505_12416	Uncharacterized protein. (402 aa)

Your Current Organism:

Streptomyces prasinopilosus

NCBI taxonomy Id: 67344
Other names: ATCC 19799, BCRC 13678, CBS 551.68, CCRC 13678, CCRC:13678, CGMCC 4.3504 [[Streptomyces emeiensis]], DSM 40098, DSM 41884 [[Streptomyces emeiensis]], IFO 12809, ISP 5098, JCM 15479 [[Streptomyces emeiensis]], JCM 4207, JCM 4404, LMG 19345, LMG:19345, NBRC 12809, NCIMB 9842, NRRL B-2711, NRRL-ISP 5098, S. prasinopilosus, Streptomyces emeiensis, Streptomyces emeiensis Sun et al. 2007, Streptomyces sp. 034776, UNIQEM 185, strain 4776 [[Streptomyces emeiensis]]

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SAMN05216505_1011131	SAMN05216505_101191	SAMN05216505_1011131	SAMN05216505_101191	Uncharacterized protein.	Nucleotide-binding universal stress protein, UspA family.	0.628
SAMN05216505_1011131	SAMN05216505_101308	SAMN05216505_1011131	SAMN05216505_101308	Uncharacterized protein.	TQXA domain-containing protein.	0.545
SAMN05216505_1011131	SAMN05216505_101382	SAMN05216505_1011131	SAMN05216505_101382	Uncharacterized protein.	Uncharacterized protein.	0.479
SAMN05216505_1011131	SAMN05216505_101418	SAMN05216505_1011131	SAMN05216505_101418	Uncharacterized protein.	Transcriptional attenuator, LytR family.	0.735
SAMN05216505_1011131	SAMN05216505_101636	SAMN05216505_1011131	SAMN05216505_101636	Uncharacterized protein.	Uncharacterized protein.	0.715
SAMN05216505_1011131	SAMN05216505_101705	SAMN05216505_1011131	SAMN05216505_101705	Uncharacterized protein.	Bifunctional DNA primase/polymerase, N-terminal.	0.590
SAMN05216505_1011131	SAMN05216505_101706	SAMN05216505_1011131	SAMN05216505_101706	Uncharacterized protein.	Uncharacterized protein.	0.718
SAMN05216505_1011131	SAMN05216505_101812	SAMN05216505_1011131	SAMN05216505_101812	Uncharacterized protein.	Uncharacterized protein.	0.639
SAMN05216505_1011131	SAMN05216505_101910	SAMN05216505_1011131	SAMN05216505_101910	Uncharacterized protein.	ABC-2 type transport system permease protein.	0.599
SAMN05216505_1011131	SAMN05216505_101911	SAMN05216505_1011131	SAMN05216505_101911	Uncharacterized protein.	Uncharacterized protein.	0.557
SAMN05216505_1011131	SAMN05216505_102207	SAMN05216505_1011131	SAMN05216505_102207	Uncharacterized protein.	Protein phosphatase 2C.	0.633
SAMN05216505_1011131	SAMN05216505_1033	SAMN05216505_1011131	SAMN05216505_1033	Uncharacterized protein.	Uncharacterized protein.	0.586
SAMN05216505_1011131	SAMN05216505_103323	SAMN05216505_1011131	SAMN05216505_103323	Uncharacterized protein.	Uncharacterized protein.	0.515
SAMN05216505_1011131	SAMN05216505_103406	SAMN05216505_1011131	SAMN05216505_103406	Uncharacterized protein.	Uncharacterized protein.	0.736
SAMN05216505_1011131	SAMN05216505_10410	SAMN05216505_1011131	SAMN05216505_10410	Uncharacterized protein.	Uncharacterized protein.	0.517
SAMN05216505_1011131	SAMN05216505_104115	SAMN05216505_1011131	SAMN05216505_104115	Uncharacterized protein.	Uncharacterized membrane protein YphA, DoxX/SURF4 family.	0.759
SAMN05216505_1011131	SAMN05216505_10416	SAMN05216505_1011131	SAMN05216505_10416	Uncharacterized protein.	Uncharacterized protein.	0.688
SAMN05216505_1011131	SAMN05216505_104246	SAMN05216505_1011131	SAMN05216505_104246	Uncharacterized protein.	Transcriptional regulator, TetR family.	0.424
SAMN05216505_1011131	SAMN05216505_104332	SAMN05216505_1011131	SAMN05216505_104332	Uncharacterized protein.	Uncharacterized protein.	0.611
SAMN05216505_1011131	SAMN05216505_104400	SAMN05216505_1011131	SAMN05216505_104400	Uncharacterized protein.	Xanthomonas XOO_2897-like deaminase.	0.765

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