STRINGSTRING
GCA_001544075_00752 GCA_001544075_00752 GCA_001544075_00857 GCA_001544075_00857 GCA_001544075_01221 GCA_001544075_01221 GCA_001544075_02169 GCA_001544075_02169 GCA_001544075_04001 GCA_001544075_04001
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001544075_00752Unannotated protein. (303 aa)
GCA_001544075_00857Unannotated protein. (354 aa)
GCA_001544075_01221Unannotated protein. (281 aa)
GCA_001544075_02169Unannotated protein. (294 aa)
GCA_001544075_04001Unannotated protein. (341 aa)
Your Current Organism:
Comamonas terrae
NCBI taxonomy Id: 673548
Other names: C. terrae, Comamonas sp. A3-3, Comamonas terrae Chitpirom et al. 2012, NBRC 106524, strain A3-3
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