STRINGSTRING
SPAR_06980 SPAR_06980 SPAR_05105 SPAR_05105 sigA sigA SPAR_03796 SPAR_03796 SPAR_02206 SPAR_02206 SPAR_20910 SPAR_20910 SPAR_20605 SPAR_20605 GCA_001704635_01451 GCA_001704635_01451 SPAR_35421 SPAR_35421 SPAR_35191 SPAR_35191 SPAR_35021 SPAR_35021 SPAR_34906 SPAR_34906 SPAR_34461 SPAR_34461 SPAR_28491 SPAR_28491 SPAR_28411 SPAR_28411 SPAR_18503 SPAR_18503 SPAR_17510 SPAR_17510 SPAR_17350 SPAR_17350 SPAR_38315 SPAR_38315 SPAR_39942 SPAR_39942 SPAR_40352 SPAR_40352 SPAR_40557 SPAR_40557 SPAR_41134 SPAR_41134 SPAR_41429 SPAR_41429 SPAR_41504 SPAR_41504 SPAR_41974 SPAR_41974 SPAR_42726 SPAR_42726 SPAR_43096 SPAR_43096 SPAR_43561 SPAR_43561 SPAR_16092 SPAR_16092 SPAR_15727 SPAR_15727 SPAR_15717 SPAR_15717 SPAR_15338 SPAR_15338 SPAR_14829 SPAR_14829 SPAR_14824 SPAR_14824 SPAR_14626 SPAR_14626 SPAR_14154 SPAR_14154 SPAR_13725 SPAR_13725 SPAR_13395 SPAR_13395 SPAR_13195 SPAR_13195 SPAR_12683 SPAR_12683 SPAR_12503 SPAR_12503 SPAR_12060 SPAR_12060 SPAR_11865 SPAR_11865 SPAR_10872 SPAR_10872 SPAR_10065 SPAR_10065 SPAR_09970 SPAR_09970 SPAR_09633 SPAR_09633 SPAR_21872 SPAR_21872 SPAR_21852 SPAR_21852 SPAR_08081 SPAR_08081 SPAR_07712 SPAR_07712 SPAR_07607 SPAR_07607 SPAR_07522 SPAR_07522 SPAR_07332 SPAR_07332 SPAR_07077 SPAR_07077 SPAR_06215 SPAR_06215
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPAR_06980Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
SPAR_05105Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (277 aa)
sigAUnannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (519 aa)
SPAR_03796Unannotated protein; Belongs to the sigma-70 factor family. (462 aa)
SPAR_02206Unannotated protein; Belongs to the sigma-70 factor family. (320 aa)
SPAR_20910Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (267 aa)
SPAR_20605Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (205 aa)
GCA_001704635_01451Unannotated protein. (212 aa)
SPAR_35421Unannotated protein; Belongs to the sigma-70 factor family. (312 aa)
SPAR_35191Unannotated protein; Belongs to the sigma-70 factor family. (285 aa)
SPAR_35021Unannotated protein; Belongs to the sigma-70 factor family. (261 aa)
SPAR_34906Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (296 aa)
SPAR_34461Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa)
SPAR_28491Unannotated protein; Belongs to the sigma-70 factor family. (268 aa)
SPAR_28411Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (335 aa)
SPAR_18503Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
SPAR_17510Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (408 aa)
SPAR_17350Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
SPAR_38315Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
SPAR_39942Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
SPAR_40352Unannotated protein; Belongs to the sigma-70 factor family. (300 aa)
SPAR_40557Unannotated protein; Belongs to the sigma-70 factor family. (321 aa)
SPAR_41134Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (275 aa)
SPAR_41429Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (221 aa)
SPAR_41504Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (308 aa)
SPAR_41974Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (207 aa)
SPAR_42726Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (234 aa)
SPAR_43096Unannotated protein; Belongs to the sigma-70 factor family. (288 aa)
SPAR_43561Unannotated protein; Belongs to the sigma-70 factor family. (393 aa)
SPAR_16092Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (209 aa)
SPAR_15727Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (198 aa)
SPAR_15717Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (238 aa)
SPAR_15338Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (166 aa)
SPAR_14829Unannotated protein; Belongs to the sigma-70 factor family. (277 aa)
SPAR_14824Unannotated protein; Belongs to the sigma-70 factor family. (276 aa)
SPAR_14626Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
SPAR_14154Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (229 aa)
SPAR_13725Unannotated protein; Belongs to the sigma-70 factor family. (314 aa)
SPAR_13395Unannotated protein; Belongs to the sigma-70 factor family. (309 aa)
SPAR_13195Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
SPAR_12683Unannotated protein; Belongs to the sigma-70 factor family. (427 aa)
SPAR_12503Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (229 aa)
SPAR_12060Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (265 aa)
SPAR_11865Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (215 aa)
SPAR_10872Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (203 aa)
SPAR_10065Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
SPAR_09970Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (333 aa)
SPAR_09633Unannotated protein; Belongs to the sigma-70 factor family. (305 aa)
SPAR_21872Unannotated protein; Belongs to the sigma-70 factor family. (312 aa)
SPAR_21852Unannotated protein; Belongs to the sigma-70 factor family. (298 aa)
SPAR_08081Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (275 aa)
SPAR_07712Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (285 aa)
SPAR_07607Unannotated protein; Belongs to the sigma-70 factor family. (313 aa)
SPAR_07522Unannotated protein; Belongs to the sigma-70 factor family. (242 aa)
SPAR_07332Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily. (196 aa)
SPAR_07077Unannotated protein; Belongs to the sigma-70 factor family. (199 aa)
SPAR_06215Unannotated protein; Belongs to the sigma-70 factor family. (307 aa)
Your Current Organism:
Streptomyces sparsogenes
NCBI taxonomy Id: 67365
Other names: ATCC 25498, BCRC 12085, CBS 672.69, CBS 958.69, CCRC 12085, CCRC:12085, DSM 40356, IFO 13086, ISP 5356, JCM 4517, LMG 5985, LMG:5985, NBRC 13086, NCIMB 9449, NRRL 2940, NRRL-ISP 5356, S. sparsogenes, Streptomyces sparsigenes, Streptomyces sparsogenes var. sparsognes
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