(41 nodes) Mixed, incl. Regulation of cell killing, and Type II secretion system (T2SS), protein F network (Rhodoplanes sp. Z2YC6860)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMN38860.1	Flp pilus assembly protein RcpC/CpaB. (292 aa)
	AMN38861.1	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family. (524 aa)
	AMN38862.1	Hypothetical protein. (116 aa)
	AMN38863.1	Flp pilus assembly protein, ATPase CpaE. (403 aa)
	AMN38864.1	Flp pilus assembly protein, ATPase CpaF. (481 aa)
	AMN38865.1	Flp pilus assembly protein TadB. (324 aa)
	AMN38866.1	Flp pilus assembly protein TadC. (316 aa)
	AMN38867.1	Tetratricopeptide TPR_2 repeat protein. (206 aa)
	AMN40268.1	AraC family transcriptional regulator. (175 aa)
	AMN40519.1	Sel1 domain-containing protein. (103 aa)
	AMN42475.1	Hypothetical protein. (412 aa)
	AMN42476.1	Flp pilus assembly protein TadG. (429 aa)
	AMN42477.1	Flp pilus assembly protein TadG. (472 aa)
	AMN43099.1	Flp/Fap pilin protein. (56 aa)
	AMN43360.1	Two-component regulator HPt. (118 aa)
	AMN43696.1	Pilus assembly protein CpaC; Belongs to the bacterial secretin family. (524 aa)
	AMN43697.1	TadE-like protein. (138 aa)
	AMN43698.1	Flp pilus assembly protein TadG. (447 aa)
	AMN43699.1	Hypothetical protein. (155 aa)
	AMN43700.1	Flp pilus assembly protein TadC. (301 aa)
	AMN43701.1	Flp pilus assembly protein TadB. (310 aa)
	AMN43702.1	Flp pilus assembly protein, ATPase CpaF. (495 aa)
	AMN43703.1	Flp pilus assembly protein, ATPase CpaE. (396 aa)
	AMN43704.1	Flp pilus assembly protein CpaB. (307 aa)
	AMN43705.1	Flp pilus assembly protein, protease CpaA. (175 aa)
	AMN44179.1	Flp pilus assembly protein TadG. (447 aa)
	AMN44293.1	Hypothetical protein. (91 aa)
	AMN45100.1	Flp pilus assembly protein TadG. (191 aa)
	AMN45101.1	TadE family protein. (190 aa)
	AMN45102.1	Hypothetical protein. (173 aa)
	AMN45103.1	Flp/Fap pilin protein. (55 aa)
	AMN45107.1	Flp/Fap pilin protein. (63 aa)
	AMN45108.1	Flp pilus assembly protein, protease CpaA. (166 aa)
	AMN45109.1	Flp pilus assembly CpaB. (261 aa)
	AMN45110.1	Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family. (484 aa)
	AMN45111.1	Caulobacter-type pilus biogenesis lipoprotein CpaD. (247 aa)
	AMN45112.1	Flp pilus assembly protein, ATPase CpaE. (425 aa)
	AMN45113.1	Flp pilus assembly protein CpaF. (503 aa)
	AMN45114.1	Flp pilus assembly protein TadB. (324 aa)
	AMN45115.1	Flp pilus assembly protein TadC. (338 aa)
	AMN45116.1	Flp pilus assembly protein TadD. (269 aa)

Your Current Organism:

Rhodoplanes sp. Z2YC6860

NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMN38860.1	AMN38861.1	RHPLAN_03950	RHPLAN_03960	Flp pilus assembly protein RcpC/CpaB.	Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.	0.968
AMN38860.1	AMN38862.1	RHPLAN_03950	RHPLAN_03970	Flp pilus assembly protein RcpC/CpaB.	Hypothetical protein.	0.654
AMN38860.1	AMN38863.1	RHPLAN_03950	RHPLAN_03980	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein, ATPase CpaE.	0.963
AMN38860.1	AMN38864.1	RHPLAN_03950	RHPLAN_03990	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein, ATPase CpaF.	0.923
AMN38860.1	AMN38865.1	RHPLAN_03950	RHPLAN_04000	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadB.	0.953
AMN38860.1	AMN38866.1	RHPLAN_03950	RHPLAN_04010	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadC.	0.949
AMN38860.1	AMN38867.1	RHPLAN_03950	RHPLAN_04020	Flp pilus assembly protein RcpC/CpaB.	Tetratricopeptide TPR_2 repeat protein.	0.759
AMN38860.1	AMN42475.1	RHPLAN_03950	RHPLAN_40430	Flp pilus assembly protein RcpC/CpaB.	Hypothetical protein.	0.670
AMN38860.1	AMN42476.1	RHPLAN_03950	RHPLAN_40440	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadG.	0.828
AMN38860.1	AMN42477.1	RHPLAN_03950	RHPLAN_40450	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadG.	0.800
AMN38860.1	AMN43099.1	RHPLAN_03950	RHPLAN_46710	Flp pilus assembly protein RcpC/CpaB.	Flp/Fap pilin protein.	0.699
AMN38860.1	AMN43696.1	RHPLAN_03950	RHPLAN_52770	Flp pilus assembly protein RcpC/CpaB.	Pilus assembly protein CpaC; Belongs to the bacterial secretin family.	0.914
AMN38860.1	AMN43700.1	RHPLAN_03950	RHPLAN_52810	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadC.	0.914
AMN38860.1	AMN43701.1	RHPLAN_03950	RHPLAN_52820	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadB.	0.917
AMN38860.1	AMN43702.1	RHPLAN_03950	RHPLAN_52830	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein, ATPase CpaF.	0.865
AMN38860.1	AMN43703.1	RHPLAN_03950	RHPLAN_52840	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein, ATPase CpaE.	0.920
AMN38860.1	AMN43705.1	RHPLAN_03950	RHPLAN_52860	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein, protease CpaA.	0.711
AMN38860.1	AMN44179.1	RHPLAN_03950	RHPLAN_57650	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadG.	0.779
AMN38860.1	AMN45100.1	RHPLAN_03950	RHPLAN_66940	Flp pilus assembly protein RcpC/CpaB.	Flp pilus assembly protein TadG.	0.601
AMN38860.1	AMN45101.1	RHPLAN_03950	RHPLAN_66950	Flp pilus assembly protein RcpC/CpaB.	TadE family protein.	0.717