(12 nodes) Limonene and pinene degradation network (Rhodoplanes sp. Z2YC6860)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	AMN38797.1	Lipase/esterase. (349 aa)
	AMN38803.1	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
	AMN40496.1	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (295 aa)
	AMN40629.1	enoyl-CoA hydratase/isomerase family protein. (257 aa)
	AMN41823.1	NAD-dependent aldehyde dehydrogenase. (477 aa)
	AMN42153.1	enoyl-CoA hydratase/isomerase. (379 aa)
	AMN42260.1	enoyl-CoA hydratase/isomerase. (251 aa)
	AMN42695.1	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (505 aa)
	AMN43629.1	3-hydroxyacyl-CoA dehydrogenase. (705 aa)
	AMN44015.1	enoyl-CoA hydratase/isomerase. (352 aa)
	AMN44821.1	3-hydroxyacyl-CoA dehydrogenase. (737 aa)
	AMN45215.1	Alpha/beta hydrolase fold-3 domain-containing protein. (301 aa)

Your Current Organism:

Rhodoplanes sp. Z2YC6860

NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMN38797.1	AMN45215.1	RHPLAN_03320	RHPLAN_68090	Lipase/esterase.	Alpha/beta hydrolase fold-3 domain-containing protein.	0.903
AMN38803.1	AMN43629.1	RHPLAN_03380	RHPLAN_52060	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxyacyl-CoA dehydrogenase.	0.932
AMN38803.1	AMN44821.1	RHPLAN_03380	RHPLAN_64150	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxyacyl-CoA dehydrogenase.	0.931
AMN40496.1	AMN43629.1	RHPLAN_20560	RHPLAN_52060	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxyacyl-CoA dehydrogenase.	0.947
AMN40496.1	AMN44821.1	RHPLAN_20560	RHPLAN_64150	enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxyacyl-CoA dehydrogenase.	0.931
AMN40629.1	AMN42153.1	RHPLAN_21890	RHPLAN_37210	enoyl-CoA hydratase/isomerase family protein.	enoyl-CoA hydratase/isomerase.	0.633
AMN40629.1	AMN43629.1	RHPLAN_21890	RHPLAN_52060	enoyl-CoA hydratase/isomerase family protein.	3-hydroxyacyl-CoA dehydrogenase.	0.951
AMN40629.1	AMN44821.1	RHPLAN_21890	RHPLAN_64150	enoyl-CoA hydratase/isomerase family protein.	3-hydroxyacyl-CoA dehydrogenase.	0.931
AMN41823.1	AMN42695.1	RHPLAN_33890	RHPLAN_42650	NAD-dependent aldehyde dehydrogenase.	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.925
AMN41823.1	AMN43629.1	RHPLAN_33890	RHPLAN_52060	NAD-dependent aldehyde dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.923
AMN41823.1	AMN44821.1	RHPLAN_33890	RHPLAN_64150	NAD-dependent aldehyde dehydrogenase.	3-hydroxyacyl-CoA dehydrogenase.	0.923
AMN42153.1	AMN40629.1	RHPLAN_37210	RHPLAN_21890	enoyl-CoA hydratase/isomerase.	enoyl-CoA hydratase/isomerase family protein.	0.633
AMN42153.1	AMN42260.1	RHPLAN_37210	RHPLAN_38280	enoyl-CoA hydratase/isomerase.	enoyl-CoA hydratase/isomerase.	0.526
AMN42153.1	AMN43629.1	RHPLAN_37210	RHPLAN_52060	enoyl-CoA hydratase/isomerase.	3-hydroxyacyl-CoA dehydrogenase.	0.932
AMN42153.1	AMN44821.1	RHPLAN_37210	RHPLAN_64150	enoyl-CoA hydratase/isomerase.	3-hydroxyacyl-CoA dehydrogenase.	0.931
AMN42260.1	AMN42153.1	RHPLAN_38280	RHPLAN_37210	enoyl-CoA hydratase/isomerase.	enoyl-CoA hydratase/isomerase.	0.526
AMN42260.1	AMN43629.1	RHPLAN_38280	RHPLAN_52060	enoyl-CoA hydratase/isomerase.	3-hydroxyacyl-CoA dehydrogenase.	0.955
AMN42260.1	AMN44821.1	RHPLAN_38280	RHPLAN_64150	enoyl-CoA hydratase/isomerase.	3-hydroxyacyl-CoA dehydrogenase.	0.951
AMN42695.1	AMN41823.1	RHPLAN_42650	RHPLAN_33890	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	NAD-dependent aldehyde dehydrogenase.	0.925
AMN42695.1	AMN43629.1	RHPLAN_42650	RHPLAN_52060	NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	3-hydroxyacyl-CoA dehydrogenase.	0.923