STRINGSTRING
EQU24_18350 EQU24_18350 EQU24_18345 EQU24_18345 EQU24_18340 EQU24_18340 rfbH rfbH EQU24_17700 EQU24_17700 EQU24_17615 EQU24_17615 EQU24_16210 EQU24_16210 lpxD lpxD fabZ fabZ EQU24_04450 EQU24_04450 EQU24_04440 EQU24_04440 EQU24_04430 EQU24_04430 EQU24_04425 EQU24_04425 EQU24_04410 EQU24_04410 EQU24_04340 EQU24_04340 EQU24_04335 EQU24_04335 EQU24_03595 EQU24_03595 kdsC kdsC EQU24_03050 EQU24_03050 EQU24_03045 EQU24_03045 fcl fcl EQU24_02430 EQU24_02430 glmU glmU EQU24_01010 EQU24_01010 pgi pgi EQU24_00400 EQU24_00400 EQU24_00375 EQU24_00375 EQU24_00355 EQU24_00355 EQU24_00330 EQU24_00330 EQU24_20755 EQU24_20755 EQU24_20210 EQU24_20210 lpxC lpxC EQU24_19425 EQU24_19425 EQU24_19225 EQU24_19225 EQU24_19215 EQU24_19215 EQU24_18820 EQU24_18820 glgA glgA glgB glgB glgC glgC EQU24_18635 EQU24_18635 glgB-2 glgB-2 lpxH lpxH EQU24_18535 EQU24_18535 EQU24_18520 EQU24_18520 EQU24_18500 EQU24_18500 rfbA-3 rfbA-3 GCA_000341735_03754 GCA_000341735_03754 EQU24_15235 EQU24_15235 EQU24_14995 EQU24_14995 EQU24_14975 EQU24_14975 fae fae EQU24_13945 EQU24_13945 EQU24_13800 EQU24_13800 EQU24_13635 EQU24_13635 EQU24_13525 EQU24_13525 fae-2 fae-2 kdsA kdsA EQU24_13000 EQU24_13000 EQU24_12975 EQU24_12975 treZ treZ lpxK lpxK kdsB kdsB tviB tviB EQU24_11425 EQU24_11425 EQU24_11415 EQU24_11415 fae-3 fae-3 tpiA tpiA fae-4 fae-4 EQU24_07910 EQU24_07910 EQU24_07905 EQU24_07905 fbp fbp EQU24_07055 EQU24_07055 EQU24_06940 EQU24_06940 EQU24_06935 EQU24_06935 EQU24_06930 EQU24_06930 rfbA rfbA EQU24_06820 EQU24_06820 EQU24_06800 EQU24_06800 EQU24_06790 EQU24_06790 EQU24_06780 EQU24_06780 EQU24_06775 EQU24_06775 EQU24_06760 EQU24_06760 EQU24_06755 EQU24_06755 rffA rffA EQU24_06725 EQU24_06725 rfbA-2 rfbA-2 GCA_000341735_01689 GCA_000341735_01689 EQU24_06430 EQU24_06430 EQU24_06410 EQU24_06410 EQU24_06405 EQU24_06405 EQU24_05740 EQU24_05740 EQU24_05100 EQU24_05100 lpxA lpxA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EQU24_18350Unannotated protein. (879 aa)
EQU24_18345Unannotated protein. (770 aa)
EQU24_18340Unannotated protein. (414 aa)
rfbHUnannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (535 aa)
EQU24_17700Unannotated protein. (1489 aa)
EQU24_17615Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (257 aa)
EQU24_16210Unannotated protein. (274 aa)
lpxDUnannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (344 aa)
fabZUnannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (147 aa)
EQU24_04450Unannotated protein. (340 aa)
EQU24_04440Unannotated protein. (379 aa)
EQU24_04430Unannotated protein. (439 aa)
EQU24_04425Unannotated protein. (398 aa)
EQU24_04410Unannotated protein. (193 aa)
EQU24_04340Unannotated protein. (414 aa)
EQU24_04335Unannotated protein. (296 aa)
EQU24_03595Unannotated protein. (340 aa)
kdsCUnannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (174 aa)
EQU24_03050Unannotated protein. (282 aa)
EQU24_03045Unannotated protein. (706 aa)
fclUnannotated protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (325 aa)
EQU24_02430Unannotated protein. (440 aa)
glmUUnannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (456 aa)
EQU24_01010Unannotated protein. (873 aa)
pgiUnannotated protein; Belongs to the GPI family. (547 aa)
EQU24_00400Unannotated protein. (665 aa)
EQU24_00375Unannotated protein. (352 aa)
EQU24_00355Unannotated protein. (412 aa)
EQU24_00330Unannotated protein. (445 aa)
EQU24_20755Unannotated protein. (265 aa)
EQU24_20210Unannotated protein. (409 aa)
lpxCUnannotated protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (307 aa)
EQU24_19425Unannotated protein. (287 aa)
EQU24_19225Unannotated protein. (428 aa)
EQU24_19215Unannotated protein. (493 aa)
EQU24_18820Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (402 aa)
glgAUnannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (476 aa)
glgBUnannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (734 aa)
glgCUnannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (424 aa)
EQU24_18635Unannotated protein; Belongs to the glycosyl hydrolase 57 family. (537 aa)
glgB-2Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (712 aa)
lpxHUnannotated protein; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (241 aa)
EQU24_18535Unannotated protein. (550 aa)
EQU24_18520Unannotated protein. (424 aa)
EQU24_18500Unannotated protein. (217 aa)
rfbA-3Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (295 aa)
GCA_000341735_03754Unannotated protein. (207 aa)
EQU24_15235Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (432 aa)
EQU24_14995Unannotated protein. (462 aa)
EQU24_14975Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. (465 aa)
faeUnannotated protein. (169 aa)
EQU24_13945Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (379 aa)
EQU24_13800Unannotated protein; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (803 aa)
EQU24_13635Unannotated protein. (297 aa)
EQU24_13525Unannotated protein. (281 aa)
fae-2Unannotated protein. (182 aa)
kdsAUnannotated protein; Belongs to the KdsA family. (277 aa)
EQU24_13000Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (459 aa)
EQU24_12975Unannotated protein. (544 aa)
treZUnannotated protein. (618 aa)
lpxKUnannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (354 aa)
kdsBUnannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (260 aa)
tviBUnannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (423 aa)
EQU24_11425Unannotated protein. (335 aa)
EQU24_11415Unannotated protein. (379 aa)
fae-3Unannotated protein. (183 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (249 aa)
fae-4Unannotated protein. (169 aa)
EQU24_07910Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (374 aa)
EQU24_07905Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (365 aa)
fbpUnannotated protein; Belongs to the FBPase class 1 family. (333 aa)
EQU24_07055Unannotated protein. (403 aa)
EQU24_06940Unannotated protein. (405 aa)
EQU24_06935Unannotated protein. (401 aa)
EQU24_06930Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (295 aa)
rfbAUnannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (306 aa)
EQU24_06820Unannotated protein. (491 aa)
EQU24_06800Unannotated protein. (316 aa)
EQU24_06790Unannotated protein. (317 aa)
EQU24_06780Unannotated protein. (305 aa)
EQU24_06775Unannotated protein. (381 aa)
EQU24_06760Unannotated protein. (681 aa)
EQU24_06755Unannotated protein. (534 aa)
rffAUnannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (372 aa)
EQU24_06725Unannotated protein. (321 aa)
rfbA-2Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (292 aa)
GCA_000341735_01689Unannotated protein. (205 aa)
EQU24_06430Unannotated protein. (397 aa)
EQU24_06410Unannotated protein. (301 aa)
EQU24_06405Unannotated protein. (505 aa)
EQU24_05740Unannotated protein. (328 aa)
EQU24_05100Unannotated protein. (381 aa)
lpxAUnannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (264 aa)
Your Current Organism:
Methylomicrobium buryatense
NCBI taxonomy Id: 675511
Other names: M. buryatense 5G, Methylomicrobium buryatense 5G, Methylomicrobium buryatense str. 5G, Methylomicrobium buryatense strain 5G
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