STRINGSTRING
rsfS rsfS EEX35858.1 EEX35858.1 EEX35880.1 EEX35880.1 EEX35956.1 EEX35956.1 EEX35960.1 EEX35960.1 EEX36064.1 EEX36064.1 EEX36066.1 EEX36066.1 pncB pncB deoD-2 deoD-2 EEX36264.1 EEX36264.1 EEX36350.1 EEX36350.1 nadE nadE EEX36414.1 EEX36414.1 EEX35749.1 EEX35749.1 EEX35669.1 EEX35669.1 nudC nudC EEX38630.1 EEX38630.1 EEX38378.1 EEX38378.1 EEX38402.1 EEX38402.1 EEX38423.1 EEX38423.1 EEX36751.1 EEX36751.1 EEX36872.1 EEX36872.1 cobB cobB EEX37263.1 EEX37263.1 lolA lolA EEX35857.1 EEX35857.1 surE surE EEX37878.1 EEX37878.1 deoD deoD EEX37769.1 EEX37769.1 EEX37761.1 EEX37761.1 nadK nadK EEX37417.1 EEX37417.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rsfSHypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (105 aa)
EEX35858.1NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. (458 aa)
EEX35880.15'-nucleotidase; Belongs to the 5'-nucleotidase family. (579 aa)
EEX35956.1MutT/nudix family protein. (175 aa)
EEX35960.1Predicted hydrolase (HAD superfamily); COG1011. (224 aa)
EEX36064.1Nicotinamidase. (205 aa)
EEX36066.1Membrane protein. (717 aa)
pncBNicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. (435 aa)
deoD-2Purine nucleoside phosphorylase. (236 aa)
EEX36264.1Potassium voltage-gated channel subfamily KQT; Most likely function alternative not yet resolved; possible potassium channel VIC family. (255 aa)
EEX36350.1Inosine-uridine preferring nucleoside hydrolase; Belongs to the IUNH family. (317 aa)
nadENAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. (279 aa)
EEX36414.1Nicotinate-nucleotide adenylyltransferase; Bacterial NadD family. (76 aa)
EEX35749.1Extracellular nuclease-related protein. (837 aa)
EEX35669.1Trk system potassium uptake protein TrkA. (458 aa)
nudCNADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. (266 aa)
EEX38630.1Soluble pyridine nucleotide transhydrogenase. (235 aa)
EEX38378.1Quinolinate phosphoribosyltransferase [decarboxylating]; Belongs to the NadC/ModD family. (296 aa)
EEX38402.1MazG protein. (267 aa)
EEX38423.1L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (534 aa)
EEX36751.1Hypothetical protein. (318 aa)
EEX36872.1Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (330 aa)
cobBNAD-dependent protein deacetylase of SIR2 family; Belongs to the sirtuin family. Class III subfamily. (244 aa)
EEX37263.1Competence/damage-inducible protein CinA; Belongs to the CinA family. (416 aa)
lolAOuter membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (197 aa)
EEX35857.1NAD(P) transhydrogenase alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. (513 aa)
surE5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (251 aa)
EEX37878.1Hypothetical protein; Similar to C-terminal domain of competence/damage-inducible protein CinA; Belongs to the CinA family. (163 aa)
deoDPurine nucleoside phosphorylase. (241 aa)
EEX37769.15'-nucleotidase; Belongs to the 5'-nucleotidase family. (663 aa)
EEX37761.1Predicted extracellular nuclease. (1089 aa)
nadKNAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (294 aa)
EEX37417.1Potassium uptake protein integral membrane component KtrA. (217 aa)
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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