STRINGSTRING
GCA_000975135_00396 GCA_000975135_00396 GCA_000975135_00397 GCA_000975135_00397 GCA_000975135_00398 GCA_000975135_00398 GCA_000975135_00399 GCA_000975135_00399 GCA_000975135_01823 GCA_000975135_01823
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000975135_00396Unannotated protein. (307 aa)
GCA_000975135_00397Unannotated protein. (264 aa)
GCA_000975135_00398Unannotated protein. (328 aa)
GCA_000975135_00399Unannotated protein. (441 aa)
GCA_000975135_01823Unannotated protein. (431 aa)
Your Current Organism:
Demequina aurantiaca
NCBI taxonomy Id: 676200
Other names: D. aurantiaca, Demequina aurantiaca Ue et al. 2011, KCTC 19745, MBIC 08347, NBRC 106265, marine actinobacterium YM12-102, strain YM12-102
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