STRINGSTRING
GCA_000975135_00350 GCA_000975135_00350 GCA_000975135_00402 GCA_000975135_00402 GCA_000975135_00541 GCA_000975135_00541 GCA_000975135_00710 GCA_000975135_00710 GCA_000975135_01213 GCA_000975135_01213 GCA_000975135_01424 GCA_000975135_01424 GCA_000975135_01578 GCA_000975135_01578 GCA_000975135_01829 GCA_000975135_01829 GCA_000975135_01915 GCA_000975135_01915 GCA_000975135_01980 GCA_000975135_01980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000975135_00350Unannotated protein. (554 aa)
GCA_000975135_00402Unannotated protein. (520 aa)
GCA_000975135_00541Unannotated protein. (461 aa)
GCA_000975135_00710Unannotated protein. (305 aa)
GCA_000975135_01213Unannotated protein. (411 aa)
GCA_000975135_01424Unannotated protein. (465 aa)
GCA_000975135_01578Unannotated protein. (78 aa)
GCA_000975135_01829Unannotated protein. (556 aa)
GCA_000975135_01915Unannotated protein. (468 aa)
GCA_000975135_01980Unannotated protein. (123 aa)
Your Current Organism:
Demequina aurantiaca
NCBI taxonomy Id: 676200
Other names: D. aurantiaca, Demequina aurantiaca Ue et al. 2011, KCTC 19745, MBIC 08347, NBRC 106265, marine actinobacterium YM12-102, strain YM12-102
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