(49 nodes) Mixed, incl. CDC42 GTPase cycle, and Small GTPase Rho network (Lasius niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RF55_21533	Disheveled-associated activator of morphogenesis 1. (119 aa)
	RF55_17120	Serine threonine-protein kinase mrck beta; Belongs to the protein kinase superfamily. (278 aa)
	RF55_16598	Adp-ribosylation factor-like protein 8b-a-like protein. (99 aa)
	RF55_16553	Breakpoint cluster region protein. (353 aa)
	RF55_15660	YqaJ domain-containing protein. (976 aa)
	RF55_14262	Rho guanine nucleotide exchange factor 12. (693 aa)
	RF55_14108	Breakpoint cluster region protein. (623 aa)
	RF55_12032	Serine threonine-protein kinase genghis khan. (299 aa)
	RF55_12269	Serine threonine-protein kinase mrck beta. (694 aa)
	RF55_11400	Disheveled-associated activator of morphogenesis 2. (404 aa)
	RF55_9797	Arf gtpase-activating protein git1. (611 aa)
	RF55_8942	Rho-related gtp-binding. (299 aa)
	RF55_8669	Rho gtpase-activating protein 1. (515 aa)
	RF55_8517	Triple functional domain protein. (752 aa)
	RF55_8518	Kalirin isoform x1. (513 aa)
	RF55_7558	Ephrin-B2; Belongs to the ephrin family. (233 aa)
	RF55_7654	Formin-like protein. (856 aa)
	RF55_7236	Mitogen-activated protein kinase kinase kinase 9. (1714 aa)
	RF55_7071	Gtp-binding protein di-ras2-like protein. (79 aa)
	RF55_6911	Unconventional myosin-ixa-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (708 aa)
	RF55_6577	Ras-like gtp-binding protein. (184 aa)
	RF55_6548	Rho gtpase-activating protein 18. (513 aa)
	RF55_6440	Ras-related protein rac1-like protein. (192 aa)
	RF55_6605	Rho gtpase-activating protein 19. (618 aa)
	RF55_5437	Gtp-binding protein rad. (294 aa)
	RF55_5280	Cytoplasmic protein nck1. (408 aa)
	RF55_5438	Gtp-binding protein rad. (88 aa)
	RF55_5258	Ras-like gtp-binding protein rho1 isoform x2 protein. (213 aa)
	RF55_5162	Tetratricopeptide repeat protein 4. (111 aa)
	RF55_4377	Pleckstrin-like proteiny domain-containing family g member 1 protein. (1366 aa)
	RF55_3377	Rho gdp-dissociation inhibitor 2 isoform x1. (200 aa)
	RF55_3101	Ras-related c3 botulinum toxin substrate 1-like protein. (119 aa)
	RF55_2694	Non-specific serine/threonine protein kinase. (624 aa)
	RF55_2670	Ephrin type-a receptor 4-a-like protein. (969 aa)
	RF55_2064	Uncharacterized protein. (1539 aa)
	RF55_1950	Rho guanine nucleotide exchange factor 11. (276 aa)
	RF55_1952	Rho guanine nucleotide exchange factor 12-like isoform x1 protein. (264 aa)
	RF55_1646	Pak-interacting exchange beta-pix cool-1. (405 aa)
	RF55_855	Rho-related btb domain-containing protein 1. (733 aa)
	RF55_639	Triple functional domain protein. (2791 aa)
	RF55_18	Sec14 domain and spectrin repeat-containing protein 1. (4628 aa)
	RF55_118	Non-specific serine/threonine protein kinase. (588 aa)
	RF55_21	Sec14 domain and spectrin repeat-containing protein 1. (4631 aa)
	RF55_18358	Disheveled-associated activator of morphogenesis 1. (471 aa)
	RF55_10440	Gtp-binding protein rad. (100 aa)
	RF55_8269	Non-specific serine/threonine protein kinase. (516 aa)
	RF55_7846	A-kinase anchor protein 13-like protein. (1253 aa)
	RF55_3272	Gtp-binding protein rem. (383 aa)
	RF55_3143	Putative coiled-coil domain-containing protein 174. (598 aa)

Your Current Organism:

Lasius niger

NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RF55_10440	RF55_11400	A0A0J7NB86	A0A0J7KFL3	Gtp-binding protein rad.	Disheveled-associated activator of morphogenesis 2.	0.474
RF55_10440	RF55_118	A0A0J7NB86	A0A0J7LBG3	Gtp-binding protein rad.	Non-specific serine/threonine protein kinase.	0.603
RF55_10440	RF55_14108	A0A0J7NB86	A0A0J7K8P0	Gtp-binding protein rad.	Breakpoint cluster region protein.	0.523
RF55_10440	RF55_14262	A0A0J7NB86	A0A0J7K8M9	Gtp-binding protein rad.	Rho guanine nucleotide exchange factor 12.	0.542
RF55_10440	RF55_15660	A0A0J7NB86	A0A0J7K5N0	Gtp-binding protein rad.	YqaJ domain-containing protein.	0.599
RF55_10440	RF55_1646	A0A0J7NB86	A0A0J7L5W7	Gtp-binding protein rad.	Pak-interacting exchange beta-pix cool-1.	0.528
RF55_10440	RF55_16553	A0A0J7NB86	A0A0J7K4K8	Gtp-binding protein rad.	Breakpoint cluster region protein.	0.523
RF55_10440	RF55_18	A0A0J7NB86	A0A0J7LBD9	Gtp-binding protein rad.	Sec14 domain and spectrin repeat-containing protein 1.	0.620
RF55_10440	RF55_18358	A0A0J7NB86	A0A0J7MUH1	Gtp-binding protein rad.	Disheveled-associated activator of morphogenesis 1.	0.474
RF55_10440	RF55_1950	A0A0J7NB86	A0A0J7L479	Gtp-binding protein rad.	Rho guanine nucleotide exchange factor 11.	0.542
RF55_10440	RF55_1952	A0A0J7NB86	A0A0J7L5E2	Gtp-binding protein rad.	Rho guanine nucleotide exchange factor 12-like isoform x1 protein.	0.542
RF55_10440	RF55_2064	A0A0J7NB86	A0A0J7L3Z8	Gtp-binding protein rad.	Uncharacterized protein.	0.598
RF55_10440	RF55_21	A0A0J7NB86	A0A0J7LC46	Gtp-binding protein rad.	Sec14 domain and spectrin repeat-containing protein 1.	0.620
RF55_10440	RF55_21533	A0A0J7NB86	A0A0J7JYC5	Gtp-binding protein rad.	Disheveled-associated activator of morphogenesis 1.	0.474
RF55_10440	RF55_2694	A0A0J7NB86	A0A0J7L2H2	Gtp-binding protein rad.	Non-specific serine/threonine protein kinase.	0.605
RF55_10440	RF55_3101	A0A0J7NB86	A0A0J7L1Y2	Gtp-binding protein rad.	Ras-related c3 botulinum toxin substrate 1-like protein.	0.472
RF55_10440	RF55_3143	A0A0J7NB86	A0A0J7NW14	Gtp-binding protein rad.	Putative coiled-coil domain-containing protein 174.	0.582
RF55_10440	RF55_3377	A0A0J7NB86	A0A0J7L187	Gtp-binding protein rad.	Rho gdp-dissociation inhibitor 2 isoform x1.	0.706
RF55_10440	RF55_4377	A0A0J7NB86	A0A0J7KYI4	Gtp-binding protein rad.	Pleckstrin-like proteiny domain-containing family g member 1 protein.	0.523
RF55_10440	RF55_5162	A0A0J7NB86	A0A0J7KWP7	Gtp-binding protein rad.	Tetratricopeptide repeat protein 4.	0.502