STRINGSTRING
RF55_1379 RF55_1379 RF55_1929 RF55_1929 RF55_1796 RF55_1796 RF55_3973 RF55_3973 RF55_4871 RF55_4871 RF55_5880 RF55_5880 RF55_7172 RF55_7172 RF55_7236 RF55_7236 RF55_7902 RF55_7902 RF55_8749 RF55_8749 RF55_9006 RF55_9006 RF55_9662 RF55_9662 RF55_15543 RF55_15543 RF55_572 RF55_572 RF55_772 RF55_772 RF55_2676 RF55_2676 RF55_3930 RF55_3930 RF55_6756 RF55_6756 RF55_9204 RF55_9204 RF55_10054 RF55_10054 RF55_309 RF55_309 RF55_498 RF55_498 RF55_705 RF55_705 RF55_1380 RF55_1380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RF55_1379Dedicator of cytokinesis protein 1. (166 aa)
RF55_1929Programmed cell death protein 6-like isoform 2 protein. (189 aa)
RF55_1796Ubiquitin-conjugating enzyme e2 variant 2. (105 aa)
RF55_3973Mitogen-activated protein kinase kinase kinase 15. (850 aa)
RF55_4871Ubiquitin carboxyl-terminal hydrolase cyld-like protein. (828 aa)
RF55_5880Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (870 aa)
RF55_7172Engulfment and cell motility protein 1. (726 aa)
RF55_7236Mitogen-activated protein kinase kinase kinase 9. (1714 aa)
RF55_7902Mitogen-activated protein kinase kinase kinase 15. (289 aa)
RF55_8749Tnf receptor-associated factor 4. (301 aa)
RF55_9006Programmed cell death 6-interacting protein. (160 aa)
RF55_9662Adapter molecule crk. (288 aa)
RF55_15543Programmed cell death 6-interacting protein. (639 aa)
RF55_572Protein roadkill-like protein. (340 aa)
RF55_772Receptor protein-tyrosine kinase. (838 aa)
RF55_2676Mitogen-activated protein kinase kinase kinase 4-like protein. (665 aa)
RF55_3930Vascular endothelial growth factor receptor 1-like protein. (387 aa)
RF55_6756Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (222 aa)
RF55_9204Striatin-3 isoformx2. (744 aa)
RF55_10054Period protein. (101 aa)
RF55_309Eukaryotic translation initiation factor 2-alpha kinase. (804 aa)
RF55_498Sh3 domain-containing ring finger protein 3. (858 aa)
RF55_705Menin-like protein. (605 aa)
RF55_1380Dedicator of cytokinesis protein 1; Belongs to the DOCK family. (1600 aa)
Your Current Organism:
Lasius niger
NCBI taxonomy Id: 67767
Other names: L. niger, Lasius (Lasius) niger
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