STRINGSTRING
ARD39319.1 ARD39319.1 ARD39320.1 ARD39320.1 hycD hycD hycE hycE ARD39323.1 ARD39323.1 ARD39324.1 ARD39324.1 ARD39325.1 ARD39325.1 ARD39326.1 ARD39326.1 ARD39327.1 ARD39327.1 ARD39328.1 ARD39328.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARD39319.1Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
ARD39320.1Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
hycDHydrogenase 3 membrane subunit; Formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
hycEHydrogenase 3 large subunit; Formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
ARD39323.1Electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ARD39324.1Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
ARD39325.1Required for the maturation of the formate hydrogenlyase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
ARD39326.1Hydrogenase 3 maturation endopeptidase HyCI; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
ARD39327.1Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (714 aa)
ARD39328.1Effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
Your Current Organism:
Edwardsiella ictaluri
NCBI taxonomy Id: 67780
Other names: ATCC 33202, CCUG 18764, CIP 81.96, DSM 13697, E. ictaluri, JCM 16934, NCTC 12122, SECFDL GA 77-52
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