(19 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins network (Edwardsiella ictaluri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

Your Input:
	ARD38290.1	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	ARD40843.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (256 aa)
	B6E78_04180	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	ARD38785.1	Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	ARD38786.1	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
	ARD38787.1	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	artM	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	ARD38788.1	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (244 aa)
	ARD38835.1	Glutamine ABC transporter substrate-binding protein GlnH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
	ARD38836.1	Glutamine ABC transporter permease GlnP; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
	glnQ	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	ARD39086.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	ARD39087.1	Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	ARD39088.1	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	artP	Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
	ARD39686.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	ARD39687.1	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	ARD39688.1	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
	ARD40918.1	Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)

Your Current Organism:

Edwardsiella ictaluri

NCBI taxonomy Id: 67780
Other names: ATCC 33202, CCUG 18764, CIP 81.96, DSM 13697, E. ictaluri, JCM 16934, NCTC 12122, SECFDL GA 77-52

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARD38290.1	ARD38785.1	B6E78_01670	B6E78_04710	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
ARD38290.1	ARD38786.1	B6E78_01670	B6E78_04715	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.981
ARD38290.1	ARD38788.1	B6E78_01670	B6E78_04730	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.981
ARD38290.1	ARD38835.1	B6E78_01670	B6E78_05015	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter substrate-binding protein GlnH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.981
ARD38290.1	ARD38836.1	B6E78_01670	B6E78_05020	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease GlnP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.454
ARD38290.1	ARD39086.1	B6E78_01670	B6E78_06555	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
ARD38290.1	ARD39087.1	B6E78_01670	B6E78_06560	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.575
ARD38290.1	ARD39088.1	B6E78_01670	B6E78_06565	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
ARD38290.1	ARD39686.1	B6E78_01670	B6E78_10085	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.497
ARD38290.1	ARD39687.1	B6E78_01670	B6E78_10090	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
ARD38290.1	ARD39688.1	B6E78_01670	B6E78_10095	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
ARD38290.1	ARD40843.1	B6E78_01670	B6E78_01675	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.999
ARD38290.1	ARD40918.1	B6E78_01670	B6E78_10100	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
ARD38290.1	B6E78_04180	B6E78_01670	B6E78_04180	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
ARD38290.1	artM	B6E78_01670	B6E78_04725	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
ARD38290.1	artP	B6E78_01670	B6E78_06570	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ARD38290.1	glnQ	B6E78_01670	B6E78_05025	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
ARD38785.1	ARD38290.1	B6E78_04710	B6E78_01670	Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
ARD38785.1	ARD38786.1	B6E78_04710	B6E78_04715	Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.990
ARD38785.1	ARD38787.1	B6E78_04710	B6E78_04720	Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988