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rnfC rnfC rnfB rnfB ARD38453.1 ARD38453.1 ARD38452.1 ARD38452.1 ARD38447.1 ARD38447.1 ARD39319.1 ARD39319.1 ARD39323.1 ARD39323.1 ARD39328.1 ARD39328.1 ARD39483.1 ARD39483.1 ARD39533.1 ARD39533.1 ARD39641.1 ARD39641.1 ARD39704.1 ARD39704.1 ARD40065.1 ARD40065.1 ARD40119.1 ARD40119.1 ARD40125.1 ARD40125.1 queG queG ARD40253.1 ARD40253.1 ARD40499.1 ARD40499.1 napF napF ARD40749.1 ARD40749.1 ARD40750.1 ARD40750.1 ARD38396.1 ARD38396.1 ARD39238.1 ARD39238.1 sdhB sdhB nuoI nuoI ARD38886.1 ARD38886.1 ARD38753.1 ARD38753.1 ARD38750.1 ARD38750.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnfCElectron transport complex subunit RsxC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (759 aa)
rnfBElectron transport complex subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (191 aa)
ARD38453.1Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1174 aa)
ARD38452.1Oxidoreductase FeS-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa)
ARD38447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1028 aa)
ARD39319.1Formate hydrogenlyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
ARD39323.1Electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
ARD39328.1Effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
ARD39483.1Sn-glycerol-3-phosphate dehydrogenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ARD39533.1Putative selenate reductase subunit YgfK; Derived by automated computational analysis using gene prediction method: Protein Homology. (1035 aa)
ARD39641.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
ARD39704.1Formate dehydrogenase subunit beta; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (317 aa)
ARD40065.1Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
ARD40119.1Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ARD40125.1Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
queGtRNA epoxyqueuosine(34) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (379 aa)
ARD40253.1Glycine radical enzyme activase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ARD40499.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
napFFerredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family. (175 aa)
ARD40749.1Ferredoxin-type protein NapG; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
ARD40750.1Quinol dehydrogenase ferredoxin subunit NapH; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
ARD38396.1Thiosulfate reductase electron transport protein PhsB; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
ARD39238.1Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (180 aa)
ARD38886.1Hydrogenase 2 protein HybA; Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
ARD38753.1Dimethylsulfoxide reductase, chain B; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
ARD38750.1Ferredoxin-type protein NapF; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
Your Current Organism:
Edwardsiella ictaluri
NCBI taxonomy Id: 67780
Other names: ATCC 33202, CCUG 18764, CIP 81.96, DSM 13697, E. ictaluri, JCM 16934, NCTC 12122, SECFDL GA 77-52
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