STRINGSTRING
SCAB_0551 SCAB_0551 SCAB_0561 SCAB_0561 SCAB_0571 SCAB_0571 CBG68998.1 CBG68998.1 CBG69000.1 CBG69000.1 CBG69001.1 CBG69001.1 CBG69002.1 CBG69002.1 CBG69205.1 CBG69205.1 CBG69206.1 CBG69206.1 CBG69207.1 CBG69207.1 CBG69208.1 CBG69208.1 CBG69209.1 CBG69209.1 CBG69218.1 CBG69218.1 CBG69219.1 CBG69219.1 CBG69220.1 CBG69220.1 CBG69221.1 CBG69221.1 CBG69222.1 CBG69222.1 SCAB_2401 SCAB_2401 SCAB_2411 SCAB_2411 SCAB_2421 SCAB_2421 CBG69909.1 CBG69909.1 CBG69911.1 CBG69911.1 CBG69912.1 CBG69912.1 CBG69913.1 CBG69913.1 CBG69914.1 CBG69914.1 CBG70101.1 CBG70101.1 CBG70102.1 CBG70102.1 CBG70103.1 CBG70103.1 CBG70122.1 CBG70122.1 CBG70123.1 CBG70123.1 CBG70124.1 CBG70124.1 bxlR bxlR bxlD bxlD bxlC bxlC bxlB bxlB bxlA bxlA SCAB_40211 SCAB_40211 msiK msiK CBG72591.1 CBG72591.1 CBG72592.1 CBG72592.1 CBG72593.1 CBG72593.1 CBG72624.1 CBG72624.1 CBG72625.1 CBG72625.1 CBG72626.1 CBG72626.1 CBG72798.1 CBG72798.1 CBG72799.1 CBG72799.1 CBG72800.1 CBG72800.1 CBG73390.1 CBG73390.1 malE malE malF malF malG malG CBG73955.1 CBG73955.1 CBG73956.1 CBG73956.1 SCAB_7331 SCAB_7331 SCAB_7341 SCAB_7341 SCAB_7351 SCAB_7351 SCAB_7361 SCAB_7361 CBG74694.1 CBG74694.1 CBG74695.1 CBG74695.1 CBG74696.1 CBG74696.1 CBG74705.1 CBG74705.1 CBG74706.1 CBG74706.1 CBG74707.1 CBG74707.1 CBG74708.1 CBG74708.1 CBG74709.1 CBG74709.1 CBG74711.1 CBG74711.1 CBG74715.1 CBG74715.1 CBG74716.1 CBG74716.1 CBG74717.1 CBG74717.1 CBG75176.1 CBG75176.1 CBG75297.1 CBG75297.1 CBG75298.1 CBG75298.1 CBG75299.1 CBG75299.1 CBG75300.1 CBG75300.1 CBG75301.1 CBG75301.1 CBG75302.1 CBG75302.1 CBG75423.1 CBG75423.1 CBG75424.1 CBG75424.1 CBG75425.1 CBG75425.1 CBG75426.1 CBG75426.1 CBG75427.1 CBG75427.1 CBG75608.1 CBG75608.1 CBG75609.1 CBG75609.1 CBG75610.1 CBG75610.1 CBG75686.1 CBG75686.1 CBG75687.1 CBG75687.1 CBG75688.1 CBG75688.1 CBG75919.1 CBG75919.1 CBG75920.1 CBG75920.1 CBG75921.1 CBG75921.1 CBG75923.1 CBG75923.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCAB_0551Putative secreted solute-binding protein (transport system associated). (455 aa)
SCAB_0561Putative binding protein dependent transport protein. (281 aa)
SCAB_0571Putative probable transmembrane transport protein. (279 aa)
CBG68998.1Putative hydrolase. (266 aa)
CBG69000.1Putative binding-protein dependent transport system, transmembrane component. (288 aa)
CBG69001.1Putative integral membrane transport protein. (317 aa)
CBG69002.1Putative probable solute-binding lipoprotein. (441 aa)
CBG69205.1Putative binding-protein dependent transport system integral membrane subunit; PMID:9603833. (285 aa)
CBG69206.1Putative binding-protein dependent transport system integral membrane subunit; PMID:11178732. (323 aa)
CBG69207.1Putative secreted solute-binding receptor (transport system associated). (440 aa)
CBG69208.1Putative beta-mannosidase; PMID:11590605; PMID:10347049. (788 aa)
CBG69209.1Putative transcriptional regulator; PMID:10347054. (340 aa)
CBG69218.1Probable transcriptional repressor protein; PMID:12111550. (403 aa)
CBG69219.1Probable integral membrane transport protein; PMID:12111550. (311 aa)
CBG69220.1Probable transmembrane transport protein. (309 aa)
CBG69221.1Putative extracellular solute-binding receptor; PMID:12111550. (490 aa)
CBG69222.1Putative secreted mannosidase; TTA-Leu codon(s) 34 may indicate regulation by BldA. (1270 aa)
SCAB_2401Putative sugar transport integral membrane protein. (305 aa)
SCAB_2411Putative sugar transport permease. (323 aa)
SCAB_2421Putative solute binding lipoprotein. (425 aa)
CBG69909.1Putative integral membrane protein; PMID: 11254130. (193 aa)
CBG69911.1Putative AfsR-like regulator; PMID: 10517581; PMID: 15921897; cluster 0230 with SCAB28161 and SCAB28181. (641 aa)
CBG69912.1Putative extracellular solute-binding lipoprotein. (469 aa)
CBG69913.1Putative binding-protein dependent transporter. (292 aa)
CBG69914.1Putative binding-protein dependent transporter. (274 aa)
CBG70101.1Putative extracellular substrate-binding protein. (451 aa)
CBG70102.1Putative binding-protein dependent transport protein. (343 aa)
CBG70103.1Putative binding-protein-dependent transport protein. (298 aa)
CBG70122.1Putative sugar binding-protein-dependent transporter; PMID: 11741848; cluster 0620 with SCAB56001. (280 aa)
CBG70123.1Putative sugar binding-protein-dependent transporter; PMID: 11741848. (330 aa)
CBG70124.1Putative extracellular sugar-binding protein; PMID: 11741848. (426 aa)
bxlRPutative transcriptional regulator; PMID: 11577723; PMID: 14761997. (353 aa)
bxlDPutative extracellular solute-binding protein; PMID: 11577723; PMID: 14761997. (454 aa)
bxlCPutative binding-protein-dependent transporter; PMID: 11577723; PMID: 14761997. (307 aa)
bxlBPutative binding-protein-dependent transporter; PMID: 11577723; PMID: 14761997. (301 aa)
bxlAPutative beta-xylosidase; PMID: 14761997; Belongs to the glycosyl hydrolase 3 family. (761 aa)
SCAB_40211Putative two-component system sensor kinase; 4 probable transmembrane helices predicted for SCAB40201 by TMHMM2.0 at aa 22-41, 48-70, 85-107 and 120-142. (416 aa)
msiKPutative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily. (378 aa)
CBG72591.1Putative binding-protein-dependent transporter. (304 aa)
CBG72592.1Putative binding-protein-dependent transporter. (429 aa)
CBG72593.1Putative extracellular solute-binding protein; TTA-Leu codon(s) 20 may indicate regulation by BldA. (487 aa)
CBG72624.1Putative extracellular sugar-binding protein; PMID:11741848. (433 aa)
CBG72625.1Putative sugar binding-protein-dependent transporter; PMID: 11741848. (313 aa)
CBG72626.1Putative sugar binding-protein-dependent transporter; PMID: 11741848; cluster 0620 with SCAB30171. (280 aa)
CBG72798.1Putative cellobiose binding-protein-dependent transport system; PMID:10347054. (305 aa)
CBG72799.1Putative cellobiose binding-protein-dependent transport system; PMID:10347054. (292 aa)
CBG72800.1Putative secreted cellobiose-binding (transport system associated); PMID:10347054. (454 aa)
CBG73390.1Putative secreted solute-binding protein. (420 aa)
malEPutative secreted maltose-binding protein; PMID:9044287; PMID:9197422. (423 aa)
malFPutative maltose transporter; PMID:9044287; PMID:9197422. (334 aa)
malGPutative maltose transporter; PMID:9044287; PMID:9197422. (306 aa)
CBG73955.1Putative secreted substrate-binding transport protein. (463 aa)
CBG73956.1Putative secreted substrate-binding transport protein. (438 aa)
SCAB_7331Putative substrate-binding transport lipoprotein. (464 aa)
SCAB_7341Putative integral membrane transport protein. (305 aa)
SCAB_7351Putative integral membrane transport protein. (309 aa)
SCAB_7361Putative beta-galactosidase. (706 aa)
CBG74694.1Putative binding-protein-dependent transport system transmembrane component; PMID:10347054. (273 aa)
CBG74695.1Putative binding-protein-dependent transport system transmembrane component; PMID:10347054. (328 aa)
CBG74696.1Putative secreted substrate-binding protein (transport system associated). (424 aa)
CBG74705.1Putative secreted substrate-binding protein (transport system associated). (442 aa)
CBG74706.1Putative binding-protein-dependent transport system integral membrane component; PMID:15870461. (317 aa)
CBG74707.1Putative binding-protein dependent transport system integral membrane component; PMID:15870461. (279 aa)
CBG74708.1Putative secreted protein; No full-length matches in db. (1137 aa)
CBG74709.1Putative secreted protein. (382 aa)
CBG74711.1Putative hydrolase. (267 aa)
CBG74715.1Putative secreted substrate-binding protein (transport system associated). (431 aa)
CBG74716.1Putative binding-protein-dependent transport system, integral membrane component. (340 aa)
CBG74717.1Putative binding-protein-dependent transport system, integral membrane component. (313 aa)
CBG75176.1Putative integral membrane transport protein. (101 aa)
CBG75297.1Putative LacI-family transcriptional regulator. (343 aa)
CBG75298.1Putative integral membrane transport protein. (301 aa)
CBG75299.1Putative integral membrane transport protein. (284 aa)
CBG75300.1Putative substrate-binding transport. (440 aa)
CBG75301.1Beta-galactosidase. (673 aa)
CBG75302.1Putative galactosidase. (522 aa)
CBG75423.1Putative sugar-binding lipoprotein. (433 aa)
CBG75424.1Putative binding-protein-dependent transport protein. (294 aa)
CBG75425.1Putative permease component of ABC transporter. (298 aa)
CBG75426.1Putative exported rhamnosidase A. (879 aa)
CBG75427.1Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family. (476 aa)
CBG75608.1Putative sugar-transporter integral membrane protein. (315 aa)
CBG75609.1Putative binding-protein-dependent transport protein. (273 aa)
CBG75610.1Putative secreted sugar-binding protein. (426 aa)
CBG75686.1Putative integral membrane transport protein. (309 aa)
CBG75687.1Putative integral membrane transport protein. (301 aa)
CBG75688.1Probable solute-binding lipoprotein. (433 aa)
CBG75919.1Putative sugar ABC-transporter integral membrane protein. (304 aa)
CBG75920.1Putative binding protein dependent transport protein. (300 aa)
CBG75921.1Probable solute-binding protein. (439 aa)
CBG75923.1Putative beta-D-xylosidase; Belongs to the glycosyl hydrolase 3 family. (771 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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