STRINGSTRING
CBG68778.1 CBG68778.1 CBG68832.1 CBG68832.1 CBG72151.1 CBG72151.1 cel1 cel1 CBG75944.1 CBG75944.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG68778.1Glucanase; Cluster 0426 with SCAB57271; Belongs to the glycosyl hydrolase family 6. (321 aa)
CBG68832.1Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6. (570 aa)
CBG72151.1Putative secreted cellulase; PMID: 8718854; TTA-Leu codon(s) 5 may indicate regulation by BldA. (516 aa)
cel1Secreted endoglucanase. (747 aa)
CBG75944.1Putative secreted cellulase; Belongs to the glycosyl hydrolase family 6. (579 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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