STRINGSTRING
pkaE pkaE CBG72471.1 CBG72471.1 CBG72472.1 CBG72472.1 CBG72473.1 CBG72473.1 CBG72474.1 CBG72474.1 CBG72475.1 CBG72475.1 CBG72477.1 CBG72477.1 CBG72478.1 CBG72478.1 CBG72479.1 CBG72479.1 CBG72480.1 CBG72480.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pkaEProtein kinase; PMID:10627033. (513 aa)
CBG72471.1Putative lipoprotein. (225 aa)
CBG72472.1Conserved hypothetical protein; PMID:1569015. (358 aa)
CBG72473.1Putative monooxygenase; PMID: 15111132; Belongs to the cytochrome P450 family. (431 aa)
CBG72474.1Putative secreted protein. (351 aa)
CBG72475.1Putative cell wall catabolism protein. (233 aa)
CBG72477.1Putative septum formation initiator. (170 aa)
CBG72478.1Conserved hypothetical protein. (180 aa)
CBG72479.1Putative hydrolase. (313 aa)
CBG72480.1Putative oxidoreductase. (462 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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