STRINGSTRING
pkaE pkaE CBG72471.1 CBG72471.1 CBG72472.1 CBG72472.1 CBG72474.1 CBG72474.1 CBG72475.1 CBG72475.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pkaEProtein kinase; PMID:10627033. (513 aa)
CBG72471.1Putative lipoprotein. (225 aa)
CBG72472.1Conserved hypothetical protein; PMID:1569015. (358 aa)
CBG72474.1Putative secreted protein. (351 aa)
CBG72475.1Putative cell wall catabolism protein. (233 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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