STRINGSTRING
CBG75359.1 CBG75359.1 CBG74444.1 CBG74444.1 SCAB_1581 SCAB_1581 CBG68649.1 CBG68649.1 CBG68687.1 CBG68687.1 sppE sppE SCAB_4831 SCAB_4831 SCAB_5841 SCAB_5841
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG75359.1Putative phosphopantetheinyl transferase; PMID:16207901; PMID:14695521; PMID:21344786; see also SCAB15441, SCAB15451; Belongs to the P-Pant transferase superfamily. (226 aa)
CBG74444.1Putative regulator; PMID:12562798. (137 aa)
SCAB_1581Conserved hypothetical protein; Some similar proteins are annotated as phosphopantetheinyl transferases, )BAF92600, EDP57114) but no conserved domain found; may be related to gene cluster SCAB1381-1481. (188 aa)
CBG68649.1Conserved hypothetical protein. (125 aa)
CBG68687.1Putative phosphopantetheinyl transferase; PMID:16207901; PMID:14695521; PMID:21344786; see also SCAB84091, SCAB84081; Belongs to the P-Pant transferase superfamily. (227 aa)
sppEPutative polyketide synthesis cyclase; PMID: 2077356; PMID: 1644304; PMID: 7881555; spore pigment. (110 aa)
SCAB_4831Conserved hypothetical protein. (253 aa)
SCAB_5841Putative exported protein. (310 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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