STRINGSTRING
hemD hemD rsmI rsmI CBG74428.1 CBG74428.1 CBG74430.1 CBG74430.1 cobI cobI cobM cobM cobL cobL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hemDPutative uroporphyrinogen-III synthase. (583 aa)
rsmIPutative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (282 aa)
CBG74428.1Putative SAM-dependent methyltransferase. (403 aa)
CBG74430.1Putative uroporphyrin-III methyltransferase. (393 aa)
cobIPrecorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Probable bifunctional protein, CobI-CobJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase. (496 aa)
cobMPrecorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family. (249 aa)
cobLprecorrin-6Y C5,15-methyltransferase [decarboxylating]. (428 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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