STRINGSTRING
CBG75318.1 CBG75318.1 CBG68649.1 CBG68649.1 hcaF hcaF CBG70582.1 CBG70582.1 CBG70717.1 CBG70717.1 CBG70968.1 CBG70968.1 SCAB_3921 SCAB_3921 CBG71052.1 CBG71052.1 CBG71232.1 CBG71232.1 CBG71241.1 CBG71241.1 CBG71331.1 CBG71331.1 CBG71445.1 CBG71445.1 SCAB_4831 SCAB_4831 CBG72045.1 CBG72045.1 SCAB_5581 SCAB_5581 SCAB_5841 SCAB_5841 CBG73610.1 CBG73610.1 CBG73745.1 CBG73745.1 CBG74286.1 CBG74286.1 CBG74638.1 CBG74638.1 CBG74723.1 CBG74723.1 CBG74765.1 CBG74765.1 CBG74988.1 CBG74988.1 CBG75107.1 CBG75107.1 CBG75108.1 CBG75108.1 SCAB_8521 SCAB_8521 CBG75479.1 CBG75479.1 CBG75602.1 CBG75602.1 CBG75749.1 CBG75749.1 SCAB_9641 SCAB_9641
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG75318.1Conserved hypothetical protein. (140 aa)
CBG68649.1Conserved hypothetical protein. (125 aa)
hcaF3-phenylpropionate dioxygenase, beta subunit; This operon in E. coli encodes a pathway for catabolism of aromatic acids; annotation transferred from E. coli. (188 aa)
CBG70582.1Putative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (334 aa)
CBG70717.1Conserved hypothetical protein. (235 aa)
CBG70968.1Conserved hypothetical protein. (147 aa)
SCAB_3921Putative sigma factor; Belongs to the sigma-70 factor family. (314 aa)
CBG71052.1Conserved hypothetical protein. (167 aa)
CBG71232.1Conserved hypothetical protein. (130 aa)
CBG71241.1Putative secreted protein. (166 aa)
CBG71331.1Conserved hypothetical protein. (131 aa)
CBG71445.1Conserved hypothetical protein. (131 aa)
SCAB_4831Conserved hypothetical protein. (253 aa)
CBG72045.1Conserved hypothetical protein; PMID:10099135. (171 aa)
SCAB_5581Conserved hypothetical protein; PMID:11731481; TTA-Leu codon(s) 63 may indicate regulation by BldA. (142 aa)
SCAB_5841Putative exported protein. (310 aa)
CBG73610.1Conserved hypothetical protein. (108 aa)
CBG73745.1Putative lipoprotein. (404 aa)
CBG74286.1Conserved hypothetical protein; Belongs to the UPF0225 family. (147 aa)
CBG74638.1Conserved hypothetical protein. (164 aa)
CBG74723.1Conserved hypothetical protein. (142 aa)
CBG74765.1Putative sigma factor; PMID:12446651; PMID:15112993; Belongs to the sigma-70 factor family. (295 aa)
CBG74988.1Conserved hypothetical protein. (138 aa)
CBG75107.1Putative reductase. (329 aa)
CBG75108.1Putative sigma factor; Belongs to the sigma-70 factor family. (315 aa)
SCAB_8521Conserved hypothetical protein. (121 aa)
CBG75479.1Putative isomerase. (135 aa)
CBG75602.1Conserved hypothetical protein. (140 aa)
CBG75749.1Hypothetical protein. (130 aa)
SCAB_9641Putative sigma factor; Belongs to the sigma-70 factor family. (308 aa)
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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