Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBG68793.1 | CBG69790.1 | SCAB_16591 | SCAB_26871 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Putative 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.883 |
| CBG68793.1 | CBG69797.1 | SCAB_16591 | SCAB_26941 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Putative branched-chain amino acid aminotransferase. | 0.516 |
| CBG68793.1 | SCAB_3581 | SCAB_16591 | SCAB_3581 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Putative oxidoreductase. | 0.952 |
| CBG68793.1 | ilvC | SCAB_16591 | SCAB_27061 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Acetolactate synthase small subunit; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.985 |
| CBG68793.1 | ilvD | SCAB_16591 | SCAB_39291 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Dihydroxy acid/phosphogluconate dehydratase; Belongs to the IlvD/Edd family. | 0.703 |
| CBG68793.1 | ilvN | SCAB_16591 | SCAB_27071 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | Acetolactate synthase small subunit. | 0.959 |
| CBG68793.1 | leuA | SCAB_16591 | SCAB_61851 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.905 |
| CBG68793.1 | leuB | SCAB_16591 | SCAB_26951 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.956 |
| CBG68793.1 | leuC | SCAB_16591 | SCAB_26611 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.599 |
| CBG68793.1 | leuD | SCAB_16591 | SCAB_26601 | Putative TPP-requiring enzyme; Belongs to the TPP enzyme family. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.606 |
| CBG68971.1 | CBG69790.1 | SCAB_18441 | SCAB_26871 | Putative aminotransferase. | Putative 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.906 |
| CBG68971.1 | CBG69797.1 | SCAB_18441 | SCAB_26941 | Putative aminotransferase. | Putative branched-chain amino acid aminotransferase. | 0.908 |
| CBG68971.1 | CBG70230.1 | SCAB_18441 | SCAB_31281 | Putative aminotransferase. | Conserved hypothetical protein; PMID: 9748440; PMID: 8458843. | 0.900 |
| CBG68971.1 | CBG70496.1 | SCAB_18441 | SCAB_33991 | Putative aminotransferase. | Putative aminotransferase. | 0.901 |
| CBG68971.1 | CBG71032.1 | SCAB_18441 | SCAB_39521 | Putative aminotransferase. | Putative N-acetyltransferase; Belongs to the acetyltransferase family. | 0.902 |
| CBG68971.1 | CBG74438.1 | SCAB_18441 | SCAB_74561 | Putative aminotransferase. | Putative pyridoxal-phosphate-dependent transaminase; PMID:7814322. | 0.907 |
| CBG68971.1 | argJ | SCAB_18441 | SCAB_74211 | Putative aminotransferase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.910 |
| CBG68971.1 | aspC | SCAB_18441 | SCAB_37271 | Putative aminotransferase. | Aspartate aminotransferase; PMID: 8675024. | 0.900 |
| CBG68971.1 | idh | SCAB_18441 | SCAB_12211 | Putative aminotransferase. | NADP(+)-dependent isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.802 |
| CBG68971.1 | ilvD | SCAB_18441 | SCAB_39291 | Putative aminotransferase. | Dihydroxy acid/phosphogluconate dehydratase; Belongs to the IlvD/Edd family. | 0.913 |
page 1 of 19