Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOW86337.1 | AOW86515.1 | BC342_07090 | BC342_08100 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | 0.686 |
| AOW86337.1 | AOW86976.1 | BC342_07090 | BC342_10840 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | 0.886 |
| AOW86337.1 | AOW86977.1 | BC342_07090 | BC342_10845 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.802 |
| AOW86337.1 | AOW86979.1 | BC342_07090 | BC342_10855 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.738 |
| AOW86337.1 | AOW86980.1 | BC342_07090 | BC342_10860 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.689 |
| AOW86337.1 | AOW87927.1 | BC342_07090 | BC342_16840 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| AOW86337.1 | AOW87968.1 | BC342_07090 | BC342_17090 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | 0.965 |
| AOW86337.1 | AOW87970.1 | BC342_07090 | BC342_17105 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
| AOW86337.1 | AOW89068.1 | BC342_07090 | BC342_23950 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. | 0.962 |
| AOW86337.1 | AOW91047.1 | BC342_07090 | BC342_08125 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| AOW86337.1 | BC342_09920 | BC342_07090 | BC342_09920 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein kinase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AOW86337.1 | BC342_16875 | BC342_07090 | BC342_16875 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
| AOW86337.1 | BC342_18435 | BC342_07090 | BC342_18435 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA amidotransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.771 |
| AOW86337.1 | ddl | BC342_07090 | BC342_25215 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.418 |
| AOW86337.1 | ftsQ | BC342_07090 | BC342_08090 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.828 |
| AOW86337.1 | mraY | BC342_07090 | BC342_08110 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.569 |
| AOW86337.1 | murC | BC342_07090 | BC342_27535 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.681 |
| AOW86337.1 | murD | BC342_07090 | BC342_08105 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.559 |
| AOW86337.1 | murE | BC342_07090 | BC342_08120 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.577 |
| AOW86337.1 | murF | BC342_07090 | BC342_08115 | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.582 |
page 1 of 43