STRINGSTRING
AOW88921.1 AOW88921.1 AOW88757.1 AOW88757.1 AOW88729.1 AOW88729.1 AOW88710.1 AOW88710.1 rpsI rpsI rplM rplM rplQ rplQ rpsK rpsK rpsM rpsM rpmJ rpmJ rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ AOW85194.1 AOW85194.1 rpmC rpmC rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ AOW88622.1 AOW88622.1 rpsG rpsG rpsL rpsL rplL rplL rplJ rplJ rplA rplA rplK rplK rpmG-2 rpmG-2 AOW88575.1 AOW88575.1 AOW91307.1 AOW91307.1 ubiX ubiX hemA hemA AOW88344.1 AOW88344.1 AOW88328.1 AOW88328.1 AOW88324.1 AOW88324.1 rpsR-2 rpsR-2 rpmE2-2 rpmE2-2 rpmG rpmG rpmB rpmB rpsN-2 rpsN-2 AOW88159.1 AOW88159.1 recR recR BC342_18125 BC342_18125 AOW88093.1 AOW88093.1 AOW88020.1 AOW88020.1 AOW87992.1 AOW87992.1 AOW87959.1 AOW87959.1 gyrA gyrA gyrB gyrB rpmH rpmH AOW87939.1 AOW87939.1 AOW87938.1 AOW87938.1 rpsF rpsF rpsR rpsR rplI rplI AOW87917.1 AOW87917.1 kptA kptA AOW87856.1 AOW87856.1 AOW87815.1 AOW87815.1 AOW87812.1 AOW87812.1 AOW91209.1 AOW91209.1 BC342_15990 BC342_15990 murQ murQ AOW87527.1 AOW87527.1 AOW87484.1 AOW87484.1 ispE ispE rplY rplY clpS clpS AOW85184.1 AOW85184.1 AOW87211.1 AOW87211.1 AOW91115.1 AOW91115.1 rplU rplU rpmA rpmA nadD nadD rpsT rpsT recO recO AOW91082.1 AOW91082.1 dnaG dnaG AOW86838.1 AOW86838.1 AOW86829.1 AOW86829.1 AOW91074.1 AOW91074.1 AOW86762.1 AOW86762.1 AOW91071.1 AOW91071.1 AOW86731.1 AOW86731.1 AOW86671.1 AOW86671.1 AOW86662.1 AOW86662.1 AOW86658.1 AOW86658.1 nfo nfo AOW86471.1 AOW86471.1 AOW91040.1 AOW91040.1 BC342_07840 BC342_07840 AOW86447.1 AOW86447.1 AOW86327.1 AOW86327.1 AOW86270.1 AOW86270.1 AOW86253.1 AOW86253.1 AOW86249.1 AOW86249.1 AOW91013.1 AOW91013.1 AOW86172.1 AOW86172.1 rpmI rpmI rplT rplT AOW86044.1 AOW86044.1 AOW86039.1 AOW86039.1 rpsD rpsD priA priA AOW85825.1 AOW85825.1 rpmE2 rpmE2 AOW85734.1 AOW85734.1 AOW85665.1 AOW85665.1 AOW85538.1 AOW85538.1 BC342_01810 BC342_01810 AOW85364.1 AOW85364.1 BC342_00510 BC342_00510 BC342_00390 BC342_00390 AOW90899.1 AOW90899.1 AOW90879.1 AOW90879.1 BC342_34915 BC342_34915 AOW90626.1 AOW90626.1 AOW90625.1 AOW90625.1 AOW90590.1 AOW90590.1 AOW91554.1 AOW91554.1 AOW90428.1 AOW90428.1 AOW90415.1 AOW90415.1 AOW90208.1 AOW90208.1 AOW90207.1 AOW90207.1 AOW89989.1 AOW89989.1 AOW89971.1 AOW89971.1 BC342_29450 BC342_29450 gvpA gvpA BC342_29420 BC342_29420 AOW89867.1 AOW89867.1 rpmF-2 rpmF-2 alc alc AOW89787.1 AOW89787.1 AOW89785.1 AOW89785.1 AOW89783.1 AOW89783.1 AOW89729.1 AOW89729.1 AOW89697.1 AOW89697.1 AOW89479.1 AOW89479.1 AOW89474.1 AOW89474.1 AOW89471.1 AOW89471.1 BC342_26410 BC342_26410 AOW89459.1 AOW89459.1 AOW89453.1 AOW89453.1 AOW89451.1 AOW89451.1 AOW89447.1 AOW89447.1 miaA miaA AOW91410.1 AOW91410.1 rpsO rpsO AOW89380.1 AOW89380.1 AOW89353.1 AOW89353.1 rpsB rpsB rplS rplS rimM rimM rpsP rpsP rpmF rpmF AOW89160.1 AOW89160.1 rpmE rpmE AOW89073.1 AOW89073.1 AOW89030.1 AOW89030.1 AOW89002.1 AOW89002.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOW88921.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
AOW88757.12-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AOW88729.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (229 aa)
AOW88710.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
rpsI30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (170 aa)
rplMHypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (147 aa)
rplQ50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (134 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (126 aa)
rpmJ50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (151 aa)
rpmD50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (200 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (127 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (185 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (107 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (95 aa)
AOW85194.1Glycine amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
rpmC50S ribosomal protein L16; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (74 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (280 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (115 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (139 aa)
rplD50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (219 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (214 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
AOW88622.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsLGlucosyl transferase; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (129 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (176 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (241 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (144 aa)
rpmG-2tRNA-Met; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
AOW88575.1DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
AOW91307.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (217 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (581 aa)
AOW88344.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AOW88328.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family. (121 aa)
AOW88324.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
rpsR-230S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa)
rpmE2-250S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
rpmG50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
rpmB50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpsN-230S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
AOW88159.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa)
BC342_18125Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (106 aa)
AOW88093.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
AOW88020.1ADP-ribosylation/crystallin J1; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
AOW87992.1Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)
AOW87959.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (864 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (694 aa)
rpmH50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. (45 aa)
AOW87939.1Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
AOW87938.1Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (366 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (96 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (78 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (148 aa)
AOW87917.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (492 aa)
kptAShort chain dehydrogenase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (195 aa)
AOW87856.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
AOW87815.1Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AOW87812.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AOW91209.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
BC342_15990ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (1317 aa)
murQN-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (311 aa)
AOW87527.1Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
AOW87484.1ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
ispE4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (298 aa)
rplY50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (196 aa)
clpSATP-dependent Clp protease adapter ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (105 aa)
AOW85184.1Glycine amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
AOW87211.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
AOW91115.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (106 aa)
rpmA50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. (84 aa)
nadDNicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (233 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (249 aa)
AOW91082.1Sirohydrochlorin cobaltochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (637 aa)
AOW86838.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
AOW86829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
AOW91074.1Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (864 aa)
AOW86762.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
AOW91071.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AOW86731.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
AOW86671.1rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
AOW86662.1Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
AOW86658.1NADPH-dependent F420 reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
nfoEndonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (298 aa)
AOW86471.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
AOW91040.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
BC342_07840Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
AOW86447.130S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
AOW86327.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
AOW86270.13-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (213 aa)
AOW86253.1Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
AOW86249.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
AOW91013.1Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
AOW86172.1Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
rpmI50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (127 aa)
AOW86044.1DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
AOW86039.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (204 aa)
priAPrimosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (722 aa)
AOW85825.1Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
rpmE250S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
AOW85734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
AOW85665.1Molybdenum cofactor biosysynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
AOW85538.1Lipopolysaccharide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
BC342_01810MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
AOW85364.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
BC342_00510TetR family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
BC342_00390Antibiotic biosynthesis monooxygenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
AOW90899.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (819 aa)
AOW90879.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
BC342_34915Transposase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
AOW90626.150S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology. (40 aa)
AOW90625.150S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
AOW90590.1Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (796 aa)
AOW91554.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
AOW90428.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (458 aa)
AOW90415.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AOW90208.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (492 aa)
AOW90207.1Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
AOW89989.14a-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
AOW89971.1Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
BC342_29450Cyclase; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (108 aa)
gvpAGas vesicle synthesis-like protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (147 aa)
BC342_29420ATP-dependent DNA ligase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
AOW89867.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
rpmF-250S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (56 aa)
alcAllantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family. (376 aa)
AOW89787.1Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (311 aa)
AOW89785.12-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
AOW89783.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
AOW89729.1Phosphonomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
AOW89697.1Cobalamin biosynthesis protein CbiX; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
AOW89479.1DNA topoisomerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (818 aa)
AOW89474.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
AOW89471.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
BC342_264103-beta hydroxysteroid dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AOW89459.1DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
AOW89453.1Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa)
AOW89451.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
AOW89447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
miaAtRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (312 aa)
AOW91410.1Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (95 aa)
AOW89380.1Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family. (318 aa)
AOW89353.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (309 aa)
rplStRNA (guanosine(37)-N1)-methyltransferase TrmD; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (116 aa)
rimMRibosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. (197 aa)
rpsP30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. (139 aa)
rpmF50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
AOW89160.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA. (74 aa)
AOW89073.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
AOW89030.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
AOW89002.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (271 aa)
Your Current Organism:
Streptomyces pactum
NCBI taxonomy Id: 68249
Other names: ATCC 27456, BCRC 12076, CBS 461.69, CBS 734.72, CCRC 12076, CCRC:12076, DSM 40530, IFO 13433, IMET 43357, ISP 5530, JCM 4288, JCM 4809, KCTC 9165, LMG 19357, LMG:19357, NBRC 13433, NCIMB 9445, NRRL 2939, NRRL ISP-5530, NRRL-ISP 5530, S. pactum, Streptomyces pactum var. pactum, Streptomyces pactus
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