STRINGSTRING
ELT46125.1 ELT46125.1 whiB whiB ELT46152.1 ELT46152.1 ELT46155.1 ELT46155.1 ELT46159.1 ELT46159.1 ELT46115.1 ELT46115.1 ELT46116.1 ELT46116.1 ELT45961.1 ELT45961.1 ELT45809.1 ELT45809.1 nucS nucS ELT45811.1 ELT45811.1 ccsB ccsB ELT45765.1 ELT45765.1 ELT45766.1 ELT45766.1 ELT45767.1 ELT45767.1 ELT45768.1 ELT45768.1 ELT45769.1 ELT45769.1 rex rex ELT45773.1 ELT45773.1 ELT45482.1 ELT45482.1 ELT45499.1 ELT45499.1 whiB-2 whiB-2 ELT45321.1 ELT45321.1 ELT45223.1 ELT45223.1 ELT45035.1 ELT45035.1 ELT44911.1 ELT44911.1 yvcK yvcK whiA whiA ELT44636.1 ELT44636.1 ELT44637.1 ELT44637.1 ELT44638.1 ELT44638.1 ELT44639.1 ELT44639.1 hemL hemL ELT44649.1 ELT44649.1 hemB hemB ELT44651.1 ELT44651.1 hemH hemH ELT44653.1 ELT44653.1 hemG hemG ELT44658.1 ELT44658.1 ELT44659.1 ELT44659.1 ELT44660.1 ELT44660.1 ELT44623.1 ELT44623.1 ELT44476.1 ELT44476.1 ELT44325.1 ELT44325.1 ELT44326.1 ELT44326.1 ELT44327.1 ELT44327.1 ELT44341.1 ELT44341.1 ELT44164.1 ELT44164.1 ELT44165.1 ELT44165.1 ELT44166.1 ELT44166.1 ELT44167.1 ELT44167.1 ELT44128.1 ELT44128.1 ELT43724.1 ELT43724.1 ELT43739.1 ELT43739.1 ELT43740.1 ELT43740.1 ELT43741.1 ELT43741.1 ELT43742.1 ELT43742.1 arc arc ELT43744.1 ELT43744.1 pup pup prcB prcB prcA prcA pafA pafA ELT43754.1 ELT43754.1 ELT43695.1 ELT43695.1 ELT43682.1 ELT43682.1 ELT43683.1 ELT43683.1 sigA sigA ELT43351.1 ELT43351.1 ELT43274.1 ELT43274.1 ELT43190.1 ELT43190.1 ELT43169.1 ELT43169.1 ELT43170.1 ELT43170.1 ELT43171.1 ELT43171.1 ELT43172.1 ELT43172.1 ELT43161.1 ELT43161.1 ELT43118.1 ELT43118.1 ELT43038.1 ELT43038.1 ELT43002.1 ELT43002.1 ELT43007.1 ELT43007.1 ELT42854.1 ELT42854.1 ELT42855.1 ELT42855.1 ELT42856.1 ELT42856.1 rbpA-2 rbpA-2 ELT42752.1 ELT42752.1 crgA crgA ELT42626.1 ELT42626.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ELT46125.1Permease; COG0628 Predicted permease. (442 aa)
whiBTranscription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (177 aa)
ELT46152.1Hypothetical protein. (113 aa)
ELT46155.1COG1376 Uncharacterized protein conserved in bacteria. (412 aa)
ELT46159.1COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase. (583 aa)
ELT46115.1Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; COG1225 Peroxiredoxin. (164 aa)
ELT46116.1Hypothetical protein. (139 aa)
ELT45961.1COG0455 ATPases involved in chromosome partitioning. (336 aa)
ELT45809.1Cold-shock DNA-binding domain-containing protein; COG1278 Cold shock proteins. (63 aa)
nucSHypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (231 aa)
ELT45811.1ATP/GTP-binding protein. (118 aa)
ccsBCOG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component. (365 aa)
ELT45765.1COG1333 ResB protein required for cytochrome c biosynthesis. (573 aa)
ELT45766.1COG0785 Cytochrome c biogenesis protein. (251 aa)
ELT45767.1Redoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. (213 aa)
ELT45768.1COG0406 Fructose-2,6-bisphosphatase. (241 aa)
ELT45769.1Hypothetical protein; Belongs to the UPF0312 family. (182 aa)
rexRedox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (234 aa)
ELT45773.1Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins. (84 aa)
ELT45482.1Hypothetical protein. (275 aa)
ELT45499.1COG3920 Signal transduction histidine kinase. (488 aa)
whiB-2WhiB family transcription factor; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (82 aa)
ELT45321.1Hypothetical protein; COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives. (186 aa)
ELT45223.1Signal transduction protein with CBS domains; COG0517 FOG: CBS domain. (141 aa)
ELT45035.1COG1329 Transcriptional regulators, similar to M. xanthus CarD. (160 aa)
ELT44911.1Hypothetical protein; COG0443 Molecular chaperone. (533 aa)
yvcKHypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (339 aa)
whiAPutative sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. (326 aa)
ELT44636.1Hypothetical protein. (988 aa)
ELT44637.1COG3480 Predicted secreted protein containing a PDZ domain. (105 aa)
ELT44638.1Hypothetical protein. (123 aa)
ELT44639.1Hypothetical protein. (483 aa)
hemLCOG0001 Glutamate-1-semialdehyde aminotransferase. (443 aa)
ELT44649.1COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (357 aa)
hemBCOG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (326 aa)
ELT44651.1uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (300 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (420 aa)
ELT44653.1Hypothetical protein. (233 aa)
hemGProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (485 aa)
ELT44658.1COG1309 Transcriptional regulator. (221 aa)
ELT44659.1Hypothetical protein. (74 aa)
ELT44660.1Integral membrane protein. (100 aa)
ELT44623.1Hypothetical protein. (99 aa)
ELT44476.1N-acetyltransferase GCN5; COG3393 Predicted acetyltransferase. (271 aa)
ELT44325.1Hypothetical protein. (237 aa)
ELT44326.1Hypothetical protein. (118 aa)
ELT44327.1Hypothetical protein. (227 aa)
ELT44341.1Hypothetical protein. (216 aa)
ELT44164.1Hypothetical protein. (734 aa)
ELT44165.1Hypothetical protein. (77 aa)
ELT44166.1Cold-shock DNA-binding protein family; COG1278 Cold shock proteins. (127 aa)
ELT44167.1Hypothetical protein. (202 aa)
ELT44128.1COG3707 Response regulator with putative antiterminator output domain. (201 aa)
ELT43724.1Hypothetical protein. (100 aa)
ELT43739.1COG2047 Uncharacterized protein (ATP-grasp superfamily). (301 aa)
ELT43740.1HAD-superfamily hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. (232 aa)
ELT43741.1Peptidase M50; COG1994 Zn-dependent proteases; Belongs to the peptidase M50B family. (390 aa)
ELT43742.1tRNA methyltransferase complex GCD14 subunit; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. (354 aa)
arcATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (583 aa)
ELT43744.1Hypothetical protein. (557 aa)
pupHypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. (67 aa)
prcBProteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (273 aa)
prcA20S proteasome subunits A and B; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (236 aa)
pafAHypothetical protein; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. (454 aa)
ELT43754.1DEAD/DEAH box helicase; COG4581 Superfamily II RNA helicase. (307 aa)
ELT43695.1Hypothetical protein; COG0789 Predicted transcriptional regulators. (197 aa)
ELT43682.1Hypothetical protein. (74 aa)
ELT43683.1COG1846 Transcriptional regulators. (175 aa)
sigARNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (226 aa)
ELT43351.1COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32). (233 aa)
ELT43274.1Hypothetical protein. (150 aa)
ELT43190.1Hypothetical protein. (250 aa)
ELT43169.1COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain. (666 aa)
ELT43170.1Putative magnesium chelatase; COG1239 Mg-chelatase subunit ChlI. (462 aa)
ELT43171.1Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family. (133 aa)
ELT43172.1Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (262 aa)
ELT43161.1Hypothetical protein. (100 aa)
ELT43118.1Hypothetical protein. (125 aa)
ELT43038.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (300 aa)
ELT43002.1Hypothetical protein. (108 aa)
ELT43007.1Hypothetical protein; COG1160 Predicted GTPases. (167 aa)
ELT42854.1COG4581 Superfamily II RNA helicase. (667 aa)
ELT42855.1COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. (551 aa)
ELT42856.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (247 aa)
rbpA-2Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. (107 aa)
ELT42752.1Integral membrane protein. (172 aa)
crgAHypothetical protein; Involved in cell division; Belongs to the CrgA family. (83 aa)
ELT42626.1Carboxyvinyl-carboxyphosphonate phosphorylmutase; COG2513 PEP phosphonomutase and related enzymes. (280 aa)
Your Current Organism:
Arthrobacter nitrophenolicus
NCBI taxonomy Id: 683150
Other names: A. nitrophenolicus, Arthrobacter sp. SJCon, DSM 23165, MTCC 10104, strain SJCon
Server load: low (32%) [HD]