66 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_14925	G domain-containing protein. (103 aa)
	TCAL_10922	Uncharacterized protein. (276 aa)
	TCAL_01771	Uncharacterized protein. (2215 aa)
	TCAL_01803	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (348 aa)
	TCAL_06262	OMPdecase domain-containing protein. (472 aa)
	TCAL_09026	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1000 aa)
	TCAL_12964	tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (636 aa)
	TCAL_00384	Uncharacterized protein. (669 aa)
	TCAL_03635	Uncharacterized protein. (296 aa)
	TCAL_00369	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (790 aa)
	TCAL_11405	Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily. (534 aa)
	TCAL_11318	Uncharacterized protein. (274 aa)
	TCAL_03884	Glutamine amidotransferase type-2 domain-containing protein. (582 aa)
	TCAL_10247	Uncharacterized protein. (532 aa)
	TCAL_08187	Uncharacterized protein. (1036 aa)
	TCAL_07268	Uncharacterized protein. (521 aa)
	TCAL_10329	Glutamine synthetase. (362 aa)
	TCAL_10813	Uncharacterized protein. (2349 aa)
	TCAL_08039	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (992 aa)
	TCAL_02280	Lysine--tRNA ligase. (584 aa)
	TCAL_16934	Uncharacterized protein. (75 aa)
	TCAL_07673	Uncharacterized protein. (319 aa)
	TCAL_03805	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (943 aa)
	TCAL_07680	Uncharacterized protein. (452 aa)
	TCAL_08083	Formyl_trans_N domain-containing protein. (232 aa)
	TCAL_03050	Uncharacterized protein. (1271 aa)
	TCAL_07473	AA_TRNA_LIGASE_II domain-containing protein. (818 aa)
	TCAL_10754	Thioredoxin_16 domain-containing protein. (701 aa)
	TCAL_04823	Amidase domain-containing protein. (583 aa)
	TCAL_07328	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (740 aa)
	TCAL_09685	Glutamine amidotransferase type-2 domain-containing protein. (1951 aa)
	TCAL_02864	DALR_1 domain-containing protein. (390 aa)
	TCAL_07341	AA_TRNA_LIGASE_II domain-containing protein. (601 aa)
	TCAL_02796	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (641 aa)
	TCAL_02444	Glutamine amidotransferase type-2 domain-containing protein. (566 aa)
	TCAL_04272	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (899 aa)
	TCAL_04770	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (422 aa)
	TCAL_04746	B3_4 domain-containing protein. (532 aa)
	TCAL_02222	ANK_REP_REGION domain-containing protein. (667 aa)
	TCAL_11096	tRNA-synt_1e domain-containing protein. (736 aa)
	TCAL_01940	B5 domain-containing protein. (583 aa)
	TCAL_01506	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (677 aa)
	TCAL_07400	AA_TRNA_LIGASE_II domain-containing protein. (647 aa)
	TCAL_09188	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1089 aa)
	TCAL_00773	Tyrosine--tRNA ligase. (619 aa)
	TCAL_00664	Uncharacterized protein. (809 aa)
	TCAL_10086	Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. (548 aa)
	TCAL_00765	AA_TRNA_LIGASE_II domain-containing protein. (499 aa)
	TCAL_07109	AA_TRNA_LIGASE_II domain-containing protein. (709 aa)
	TCAL_01623	Uncharacterized protein. (500 aa)
	TCAL_09361	Uncharacterized protein. (802 aa)
	TCAL_10151	Uncharacterized protein. (337 aa)
	TCAL_02691	Uncharacterized protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (1217 aa)
	TCAL_06366	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1082 aa)
	TCAL_00025	Uncharacterized protein. (1041 aa)
	TCAL_07610	Uncharacterized protein. (590 aa)
	TCAL_06166	FDX-ACB domain-containing protein. (418 aa)
	TCAL_09455	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1045 aa)
	TCAL_09041	Uncharacterized protein. (463 aa)
	TCAL_06605	Amidase domain-containing protein. (601 aa)
	TCAL_07053	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (509 aa)
	TCAL_12101	Amidase domain-containing protein. (522 aa)
	TCAL_04316	ANK_REP_REGION domain-containing protein. (494 aa)
	TCAL_09280	Uncharacterized protein. (717 aa)
	TCAL_15553	Uncharacterized protein. (424 aa)
	P5CS	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (857 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
P5CS	TCAL_00369	Q8MUS7	A0A553NBV6	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.622
P5CS	TCAL_00765	Q8MUS7	A0A553PCE8	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.559
P5CS	TCAL_00773	Q8MUS7	A0A553PAA6	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Tyrosine--tRNA ligase.	0.775
P5CS	TCAL_01506	Q8MUS7	A0A553P8D9	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.447
P5CS	TCAL_01771	Q8MUS7	A0A553N7P2	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.937
P5CS	TCAL_01940	Q8MUS7	A0A553P7X3	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	B5 domain-containing protein.	0.430
P5CS	TCAL_02222	Q8MUS7	A0A553P751	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	ANK_REP_REGION domain-containing protein.	0.933
P5CS	TCAL_02280	Q8MUS7	A0A553NP47	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Lysine--tRNA ligase.	0.628
P5CS	TCAL_02444	Q8MUS7	A0A553NZY0	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Glutamine amidotransferase type-2 domain-containing protein.	0.950
P5CS	TCAL_02796	Q8MUS7	A0A553NZM4	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.549
P5CS	TCAL_02864	Q8MUS7	A0A553NZ08	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	DALR_1 domain-containing protein.	0.449
P5CS	TCAL_03050	Q8MUS7	A0A553NU49	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.748
P5CS	TCAL_03805	Q8MUS7	A0A553NSB1	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.977
P5CS	TCAL_03884	Q8MUS7	A0A553NCU6	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Glutamine amidotransferase type-2 domain-containing protein.	0.937
P5CS	TCAL_04316	Q8MUS7	A0A553PRK5	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	ANK_REP_REGION domain-containing protein.	0.916
P5CS	TCAL_04746	Q8MUS7	A0A553P407	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	B3_4 domain-containing protein.	0.430
P5CS	TCAL_04823	Q8MUS7	A0A553NXT1	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Amidase domain-containing protein.	0.755
P5CS	TCAL_06166	Q8MUS7	A0A553PJP5	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	FDX-ACB domain-containing protein.	0.559
P5CS	TCAL_06262	Q8MUS7	A0A553N8X9	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	OMPdecase domain-containing protein.	0.670
P5CS	TCAL_06605	Q8MUS7	A0A553PNT7	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Amidase domain-containing protein.	0.755