74 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_02151	Uncharacterized protein. (594 aa)
	TCAL_01797	COesterase domain-containing protein. (650 aa)
	TCAL_04393	Peptidase_M28 domain-containing protein. (500 aa)
	TCAL_03714	Uncharacterized protein; Belongs to the MAGUK family. (638 aa)
	TCAL_13366	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (564 aa)
	TCAL_11235	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (616 aa)
	TCAL_03172	COesterase domain-containing protein. (1138 aa)
	TCAL_09151	COesterase domain-containing protein. (529 aa)
	TCAL_09520	COesterase domain-containing protein. (638 aa)
	TCAL_02084	Uncharacterized protein. (677 aa)
	TCAL_06871	Peptidase_M28 domain-containing protein. (478 aa)
	TCAL_04643	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (534 aa)
	TCAL_02277	Uncharacterized protein. (545 aa)
	TCAL_08046	COesterase domain-containing protein. (675 aa)
	TCAL_08049	COesterase domain-containing protein. (173 aa)
	TCAL_04350	COesterase domain-containing protein. (985 aa)
	TCAL_05249	FERM domain-containing protein. (961 aa)
	TCAL_15806	Ig-like domain-containing protein. (102 aa)
	TCAL_13578	Ig-like domain-containing protein. (141 aa)
	TCAL_03459	Uncharacterized protein. (332 aa)
	TCAL_04351	COesterase domain-containing protein. (890 aa)
	TCAL_05884	Uncharacterized protein. (788 aa)
	TCAL_10473	Uncharacterized protein. (532 aa)
	TCAL_04360	Uncharacterized protein. (553 aa)
	TCAL_03468	IG domain-containing protein. (269 aa)
	TCAL_13685	Uncharacterized protein. (335 aa)
	TCAL_05250	COesterase domain-containing protein; Belongs to the type-B carboxylesterase/lipase family. (752 aa)
	TCAL_12216	Uncharacterized protein. (813 aa)
	TCAL_16501	Ig-like domain-containing protein. (99 aa)
	TCAL_04427	Uncharacterized protein. (823 aa)
	TCAL_01222	Uncharacterized protein. (911 aa)
	TCAL_05946	MAM domain-containing protein. (216 aa)
	TCAL_10027	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (593 aa)
	TCAL_00258	Uncharacterized protein. (1383 aa)
	TCAL_14858	COesterase domain-containing protein. (1161 aa)
	TCAL_01088	FERM domain-containing protein. (567 aa)
	TCAL_03115	Uncharacterized protein. (1454 aa)
	TCAL_03388	FAS1 domain-containing protein. (851 aa)
	TCAL_12673	Uncharacterized protein. (1044 aa)
	TCAL_12672	Uncharacterized protein. (361 aa)
	TCAL_02196	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family. (718 aa)
	TCAL_09914	COesterase domain-containing protein. (897 aa)
	TCAL_06710	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (514 aa)
	TCAL_15598	Uncharacterized protein. (4091 aa)
	TCAL_08539	Uncharacterized protein. (4575 aa)
	TCAL_07384	Uncharacterized protein. (483 aa)
	TCAL_07505	Ig-like domain-containing protein. (227 aa)
	TCAL_12140	Uncharacterized protein. (702 aa)
	TCAL_04976	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family. (1373 aa)
	TCAL_07020	Uncharacterized protein. (521 aa)
	TCAL_13707	Peptidase_M28 domain-containing protein. (693 aa)
	TCAL_13297	COesterase domain-containing protein. (573 aa)
	TCAL_08352	Uncharacterized protein. (866 aa)
	TCAL_05343	COesterase domain-containing protein. (610 aa)
	TCAL_11403	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (577 aa)
	TCAL_09217	Uncharacterized protein. (756 aa)
	TCAL_16671	LAM_G_DOMAIN domain-containing protein. (284 aa)
	TCAL_01681	Uncharacterized protein. (1060 aa)
	TCAL_06802	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (574 aa)
	TCAL_14387	Ig-like domain-containing protein. (155 aa)
	TCAL_10907	Peptidase_M28 domain-containing protein. (690 aa)
	TCAL_01750	Uncharacterized protein. (772 aa)
	TCAL_01738	Uncharacterized protein. (1593 aa)
	TCAL_08512	COesterase domain-containing protein. (1427 aa)
	TCAL_12149	Uncharacterized protein. (627 aa)
	TCAL_06182	Uncharacterized protein. (505 aa)
	TCAL_10650	Uncharacterized protein. (1385 aa)
	TCAL_12710	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family. (938 aa)
	TCAL_07563	COesterase domain-containing protein. (272 aa)
	TCAL_04806	Uncharacterized protein. (673 aa)
	TCAL_10722	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (588 aa)
	TCAL_12723	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (644 aa)
	TCAL_12327	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family. (1100 aa)
	TCAL_13590	COesterase domain-containing protein. (270 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00258	TCAL_02084	A0A553P240	A0A553NCL5	Uncharacterized protein.	Uncharacterized protein.	0.727
TCAL_00258	TCAL_03714	A0A553P240	A0A553N7W1	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.444
TCAL_00258	TCAL_05884	A0A553P240	A0A553NQ08	Uncharacterized protein.	Uncharacterized protein.	0.727
TCAL_00258	TCAL_12216	A0A553P240	A0A553NSH7	Uncharacterized protein.	Uncharacterized protein.	0.727
TCAL_00258	TCAL_16501	A0A553P240	A0A553NUD9	Uncharacterized protein.	Ig-like domain-containing protein.	0.727
TCAL_01088	TCAL_01738	A0A553P3D1	A0A553PKZ8	FERM domain-containing protein.	Uncharacterized protein.	0.524
TCAL_01088	TCAL_01797	A0A553P3D1	A0A553N7D5	FERM domain-containing protein.	COesterase domain-containing protein.	0.403
TCAL_01088	TCAL_02151	A0A553P3D1	A0A553N799	FERM domain-containing protein.	Uncharacterized protein.	0.409
TCAL_01088	TCAL_02196	A0A553P3D1	A0A553P5Z9	FERM domain-containing protein.	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family.	0.413
TCAL_01088	TCAL_02277	A0A553P3D1	A0A553NNJ4	FERM domain-containing protein.	Uncharacterized protein.	0.415
TCAL_01088	TCAL_03172	A0A553P3D1	A0A553N8W3	FERM domain-containing protein.	COesterase domain-containing protein.	0.415
TCAL_01088	TCAL_03388	A0A553P3D1	A0A553P3T7	FERM domain-containing protein.	FAS1 domain-containing protein.	0.403
TCAL_01088	TCAL_03714	A0A553P3D1	A0A553N7W1	FERM domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.667
TCAL_01088	TCAL_04350	A0A553P3D1	A0A553NPE3	FERM domain-containing protein.	COesterase domain-containing protein.	0.415
TCAL_01088	TCAL_04351	A0A553P3D1	A0A553NPV1	FERM domain-containing protein.	COesterase domain-containing protein.	0.415
TCAL_01088	TCAL_04643	A0A553P3D1	A0A553NFJ6	FERM domain-containing protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.413
TCAL_01088	TCAL_04976	A0A553P3D1	A0A553PDB6	FERM domain-containing protein.	Uncharacterized protein; Belongs to the type-B carboxylesterase/lipase family.	0.415
TCAL_01088	TCAL_05249	A0A553P3D1	A0A553NPR9	FERM domain-containing protein.	FERM domain-containing protein.	0.520
TCAL_01088	TCAL_05250	A0A553P3D1	A0A553NR33	FERM domain-containing protein.	COesterase domain-containing protein; Belongs to the type-B carboxylesterase/lipase family.	0.403
TCAL_01088	TCAL_05343	A0A553P3D1	A0A553PFM9	FERM domain-containing protein.	COesterase domain-containing protein.	0.415