STRINGSTRING
TCAL_04939 TCAL_04939 TCAL_11121 TCAL_11121 TCAL_07688 TCAL_07688 TCAL_05423 TCAL_05423 TCAL_00094 TCAL_00094 TCAL_01712 TCAL_01712
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCAL_04939Ubiquitin-like domain-containing protein. (1328 aa)
TCAL_11121RING-type domain-containing protein. (374 aa)
TCAL_07688ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] (347 aa)
TCAL_05423TPR_REGION domain-containing protein. (320 aa)
TCAL_00094Uncharacterized protein. (173 aa)
TCAL_01712Uncharacterized protein. (345 aa)
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
Server load: low (20%) [HD]