110 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_12968	Aspartate aminotransferase. (485 aa)
	TCAL_04206	Uncharacterized protein. (294 aa)
	TCAL_04208	Uncharacterized protein; Belongs to the MAGUK family. (812 aa)
	TCAL_07862	Uncharacterized protein; Belongs to the MAGUK family. (832 aa)
	TCAL_03714	Uncharacterized protein; Belongs to the MAGUK family. (638 aa)
	TCAL_03172	COesterase domain-containing protein. (1138 aa)
	TCAL_16257	UPAR/Ly6 domain-containing protein. (151 aa)
	TCAL_08409	Uncharacterized protein. (1017 aa)
	TCAL_08406	Elp3 domain-containing protein. (362 aa)
	TCAL_06255	Uncharacterized protein. (261 aa)
	TCAL_11259	Uncharacterized protein. (369 aa)
	TCAL_00360	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (467 aa)
	TCAL_02062	Uncharacterized protein. (1151 aa)
	TCAL_00890	Uncharacterized protein. (3707 aa)
	TCAL_08301	Uncharacterized protein. (2435 aa)
	TCAL_00431	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (716 aa)
	TCAL_07695	Uncharacterized protein. (1750 aa)
	inx-5	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (366 aa)
	TCAL_10329	Glutamine synthetase. (362 aa)
	TCAL_08046	COesterase domain-containing protein. (675 aa)
	TCAL_08049	COesterase domain-containing protein. (173 aa)
	TCAL_09706	Homeobox domain-containing protein. (345 aa)
	TCAL_02266	Uncharacterized protein. (932 aa)
	TCAL_04350	COesterase domain-containing protein. (985 aa)
	TCAL_11116	Uncharacterized protein. (369 aa)
	TCAL_04351	COesterase domain-containing protein. (890 aa)
	TCAL_03751	Uncharacterized protein. (668 aa)
	TCAL_07829	Uncharacterized protein. (645 aa)
	TCAL_02724	Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family. (1284 aa)
	TCAL_11471	Protein kinase domain-containing protein. (569 aa)
	TCAL_06934	Ig-like domain-containing protein. (240 aa)
	TCAL_04170	Uncharacterized protein. (508 aa)
	TCAL_12898	BZIP domain-containing protein. (268 aa)
	TCAL_07631	Uncharacterized protein. (1800 aa)
	TCAL_08625	Uncharacterized protein. (169 aa)
	TCAL_15048	Uncharacterized protein. (184 aa)
	TCAL_15015	Uncharacterized protein. (256 aa)
	TCAL_05192	Uncharacterized protein. (1043 aa)
	TCAL_11370	FAD_binding_3 domain-containing protein. (555 aa)
	TCAL_02883	Uncharacterized protein. (1062 aa)
	TCAL_10319	Protein kinase domain-containing protein. (996 aa)
	TCAL_10310	Uncharacterized protein. (437 aa)
	TCAL_05282	Uncharacterized protein. (2819 aa)
	TCAL_11384	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (461 aa)
	TCAL_12315	Protein kinase domain-containing protein. (632 aa)
	TCAL_01178	MFS domain-containing protein. (601 aa)
	TCAL_10135	Uncharacterized protein. (559 aa)
	TCAL_04754	Prospero domain-containing protein. (1463 aa)
	TCAL_00258	Uncharacterized protein. (1383 aa)
	TCAL_01076	Uncharacterized protein. (2106 aa)
	TCAL_14858	COesterase domain-containing protein. (1161 aa)
	TCAL_09608	Uncharacterized protein. (372 aa)
	TCAL_03411	Non-specific serine/threonine protein kinase. (829 aa)
	TCAL_13077	Uncharacterized protein. (532 aa)
	TCAL_01080	Uncharacterized protein. (727 aa)
	TCAL_03115	Uncharacterized protein. (1454 aa)
	TCAL_12673	Uncharacterized protein. (1044 aa)
	TCAL_12672	Uncharacterized protein. (361 aa)
	TCAL_03391	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (187 aa)
	TCAL_11987	Uncharacterized protein; Belongs to the MAGUK family. (1099 aa)
	TCAL_01878	Uncharacterized protein. (2063 aa)
	TCAL_01935	Uncharacterized protein. (2654 aa)
	TCAL_11099	Uncharacterized protein. (1513 aa)
	TCAL_00896	Uncharacterized protein. (310 aa)
	TCAL_11678	Uncharacterized protein. (128 aa)
	TCAL_01880	KIX domain-containing protein. (149 aa)
	TCAL_07758	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (283 aa)
	TCAL_00953	Uncharacterized protein. (1017 aa)
	TCAL_08169	Uncharacterized protein. (138 aa)
	TCAL_15746	Uncharacterized protein. (224 aa)
	TCAL_05061	Uncharacterized protein. (1199 aa)
	TCAL_07037	ATP-grasp domain-containing protein. (1280 aa)
	TCAL_01609	Uncharacterized protein. (3019 aa)
	TCAL_00538	Uncharacterized protein. (359 aa)
	TCAL_00539	Uncharacterized protein. (362 aa)
	TCAL_01639	Uncharacterized protein; Belongs to the MAGUK family. (484 aa)
	TCAL_06344	Uncharacterized protein. (354 aa)
	TCAL_04520	Uncharacterized protein. (1259 aa)
	TCAL_07502	MFS domain-containing protein. (493 aa)
	TCAL_04505	MFS domain-containing protein. (582 aa)
	TCAL_04975	Uncharacterized protein. (1593 aa)
	inx-22	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (378 aa)
	TCAL_11864	Uncharacterized protein. (2009 aa)
	TCAL_03868	Uncharacterized protein. (444 aa)
	TCAL_08352	Uncharacterized protein. (866 aa)
	TCAL_08554	Uncharacterized protein; Belongs to the MAGUK family. (532 aa)
	TCAL_12643	Uncharacterized protein. (636 aa)
	TCAL_12647	FYVE_2 domain-containing protein. (72 aa)
	TCAL_14767	Uncharacterized protein. (148 aa)
	TCAL_03504	Uncharacterized protein. (758 aa)
	TCAL_03505	Uncharacterized protein. (617 aa)
	TCAL_09587	GB1/RHD3-type G domain-containing protein. (543 aa)
	TCAL_00162	Uncharacterized protein. (1159 aa)
	TCAL_13210	Uncharacterized protein. (194 aa)
	TCAL_16671	LAM_G_DOMAIN domain-containing protein. (284 aa)
	TCAL_15345	MBD domain-containing protein. (1186 aa)
	TCAL_07854	Uncharacterized protein. (2431 aa)
	TCAL_12444	Uncharacterized protein. (356 aa)
	TCAL_06765	TFCD_C domain-containing protein. (1168 aa)
	TCAL_14378	BZIP domain-containing protein. (271 aa)
	TCAL_01738	Uncharacterized protein. (1593 aa)
	TCAL_10650	Uncharacterized protein. (1385 aa)
	TCAL_14792	PB1 domain-containing protein. (117 aa)
	TCAL_06780	Uncharacterized protein. (1181 aa)
	TCAL_05984	Uncharacterized protein. (1084 aa)
	TCAL_05122	Uncharacterized protein. (368 aa)
	TCAL_09819	Tetraspanin. (246 aa)
	TCAL_13263	Uncharacterized protein. (391 aa)
	TCAL_12515	Uncharacterized protein. (1263 aa)
	TCAL_07796	Uncharacterized protein. (242 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00162	TCAL_00258	A0A553PI46	A0A553P240	Uncharacterized protein.	Uncharacterized protein.	0.682
TCAL_00162	TCAL_00953	A0A553PI46	A0A553P7W5	Uncharacterized protein.	Uncharacterized protein.	0.668
TCAL_00162	TCAL_01935	A0A553PI46	A0A553P6G4	Uncharacterized protein.	Uncharacterized protein.	0.668
TCAL_00162	TCAL_03115	A0A553PI46	A0A553P3I8	Uncharacterized protein.	Uncharacterized protein.	0.682
TCAL_00162	TCAL_05282	A0A553PI46	A0A553NZN9	Uncharacterized protein.	Uncharacterized protein.	0.433
TCAL_00162	TCAL_08352	A0A553PI46	A0A553PF91	Uncharacterized protein.	Uncharacterized protein.	0.682
TCAL_00162	TCAL_12643	A0A553PI46	A0A553PGG7	Uncharacterized protein.	Uncharacterized protein.	0.436
TCAL_00162	TCAL_12647	A0A553PI46	A0A553PGH0	Uncharacterized protein.	FYVE_2 domain-containing protein.	0.436
TCAL_00162	TCAL_12672	A0A553PI46	A0A553P4P8	Uncharacterized protein.	Uncharacterized protein.	0.651
TCAL_00162	TCAL_12673	A0A553PI46	A0A553P4J1	Uncharacterized protein.	Uncharacterized protein.	0.682
TCAL_00258	TCAL_00162	A0A553P240	A0A553PI46	Uncharacterized protein.	Uncharacterized protein.	0.682
TCAL_00258	TCAL_01639	A0A553P240	A0A553PCG4	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.444
TCAL_00258	TCAL_03714	A0A553P240	A0A553N7W1	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.444
TCAL_00360	TCAL_12315	A0A553NBU4	A0A553P034	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	Protein kinase domain-containing protein.	0.997
TCAL_00360	TCAL_12898	A0A553NBU4	A0A553NU43	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	BZIP domain-containing protein.	0.669
TCAL_00360	TCAL_14378	A0A553NBU4	A0A553PKW3	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	BZIP domain-containing protein.	0.669
TCAL_00360	TCAL_15048	A0A553NBU4	A0A553NX74	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	Uncharacterized protein.	0.529
TCAL_00360	TCAL_15345	A0A553NBU4	A0A553PJD1	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	MBD domain-containing protein.	0.427
TCAL_00431	TCAL_01639	A0A553NEF3	A0A553PCG4	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Uncharacterized protein; Belongs to the MAGUK family.	0.461
TCAL_00431	TCAL_03391	A0A553NEF3	A0A553P4T6	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.550