STRINGSTRING
TCAL_14705 TCAL_14705 TCAL_04034 TCAL_04034 TCAL_08550 TCAL_08550 TCAL_00158 TCAL_00158 TCAL_11351 TCAL_11351 TCAL_11392 TCAL_11392 TCAL_04061 TCAL_04061 TCAL_00033 TCAL_00033 TCAL_03848 TCAL_03848 TCAL_00017 TCAL_00017 TCAL_03516 TCAL_03516 TCAL_09367 TCAL_09367 TCAL_00612 TCAL_00612 TCAL_08566 TCAL_08566 TCAL_08565 TCAL_08565 TCAL_00499 TCAL_00499 TCAL_00521 TCAL_00521 TCAL_00540 TCAL_00540 TCAL_06410 TCAL_06410 TCAL_11248 TCAL_11248 TCAL_06345 TCAL_06345 TCAL_01659 TCAL_01659 TCAL_01310 TCAL_01310 TCAL_09861 TCAL_09861 TCAL_10432 TCAL_10432 TCAL_14583 TCAL_14583 TCAL_14585 TCAL_14585 TCAL_01668 TCAL_01668 TCAL_16850 TCAL_16850 TCAL_14584 TCAL_14584 TCAL_06329 TCAL_06329 TCAL_04538 TCAL_04538 TCAL_07111 TCAL_07111 TCAL_09194 TCAL_09194 TCAL_00734 TCAL_00734 TCAL_09515 TCAL_09515 TCAL_00730 TCAL_00730 TCAL_00552 TCAL_00552 TCAL_09185 TCAL_09185 TCAL_11251 TCAL_11251 TCAL_00692 TCAL_00692 TCAL_15679 TCAL_15679 TCAL_13722 TCAL_13722 TCAL_10094 TCAL_10094 TCAL_10092 TCAL_10092 TCAL_01300 TCAL_01300 TCAL_04609 TCAL_04609 TCAL_05060 TCAL_05060 TCAL_06698 TCAL_06698 TCAL_02578 TCAL_02578 TCAL_02552 TCAL_02552 TCAL_00974 TCAL_00974 TCAL_00913 TCAL_00913 TCAL_01865 TCAL_01865 TCAL_05838 TCAL_05838 TCAL_14657 TCAL_14657 TCAL_06975 TCAL_06975 TCAL_05542 TCAL_05542 TCAL_15786 TCAL_15786 TCAL_02561 TCAL_02561 TCAL_08178 TCAL_08178 TCAL_02201 TCAL_02201 TCAL_00967 TCAL_00967 TCAL_12909 TCAL_12909 TCAL_06718 TCAL_06718 TCAL_06716 TCAL_06716 TCAL_10604 TCAL_10604 TCAL_13230 TCAL_13230 TCAL_06726 TCAL_06726 TCAL_10388 TCAL_10388 TCAL_03963 TCAL_03963 TCAL_01022 TCAL_01022 TCAL_13629 TCAL_13629 TCAL_04744 TCAL_04744 TCAL_11453 TCAL_11453 TCAL_08454 TCAL_08454 TCAL_14894 TCAL_14894 TCAL_09053 TCAL_09053 TCAL_01106 TCAL_01106 TCAL_10596 TCAL_10596 TCAL_02259 TCAL_02259 TCAL_10044 TCAL_10044 TCAL_06607 TCAL_06607 TCAL_07300 TCAL_07300 TCAL_06602 TCAL_06602 TCAL_05003 TCAL_05003 TCAL_15309 TCAL_15309 TCAL_01749 TCAL_01749 TCAL_12932 TCAL_12932 TCAL_07842 TCAL_07842 TCAL_10660 TCAL_10660 TCAL_04243 TCAL_04243 TCAL_06763 TCAL_06763 TCAL_04267 TCAL_04267 TCAL_15332 TCAL_15332 TCAL_09762 TCAL_09762 TCAL_07046 TCAL_07046 TCAL_07214 TCAL_07214 TCAL_02940 TCAL_02940 TCAL_02301 TCAL_02301 TCAL_04369 TCAL_04369 TCAL_05521 TCAL_05521 TCAL_02755 TCAL_02755 TCAL_02956 TCAL_02956 TCAL_11445 TCAL_11445 TCAL_15069 TCAL_15069 TCAL_11721 TCAL_11721 TCAL_03570 TCAL_03570 TCAL_03578 TCAL_03578 TCAL_06868 TCAL_06868 TCAL_00804 TCAL_00804 TCAL_03600 TCAL_03600 TCAL_00356 TCAL_00356 TCAL_00355 TCAL_00355 TCAL_06272 TCAL_06272 TCAL_00336 TCAL_00336 TCAL_07713 TCAL_07713 TCAL_00784 TCAL_00784 TCAL_02073 TCAL_02073 TCAL_02136 TCAL_02136 TCAL_02132 TCAL_02132 TCAL_17439 TCAL_17439 TCAL_07460 TCAL_07460 TCAL_03581 TCAL_03581 TCAL_00878 TCAL_00878 TCAL_14298 TCAL_14298 TCAL_06861 TCAL_06861 TCAL_00373 TCAL_00373 TCAL_04901 TCAL_04901 TCAL_07294 TCAL_07294 TCAL_08201 TCAL_08201 TCAL_13732 TCAL_13732 TCAL_07137 TCAL_07137 TCAL_08696 TCAL_08696 TCAL_17400 TCAL_17400 TCAL_00405 TCAL_00405 TCAL_00363 TCAL_00363 TCAL_00382 TCAL_00382 TCAL_02097 TCAL_02097 TCAL_14352 TCAL_14352 TCAL_09032 TCAL_09032 TCAL_02105 TCAL_02105 TCAL_14371 TCAL_14371 TCAL_04650 TCAL_04650 TCAL_02609 TCAL_02609 TCAL_07136 TCAL_07136 TCAL_04015 TCAL_04015 TCAL_00487 TCAL_00487 TCAL_00482 TCAL_00482 TCAL_03638 TCAL_03638 TCAL_00861 TCAL_00861 TCAL_02027 TCAL_02027 TCAL_00320 TCAL_00320 TCAL_00403 TCAL_00403 TCAL_13181 TCAL_13181 TCAL_03921 TCAL_03921 TCAL_07148 TCAL_07148 TCAL_10987 TCAL_10987 TCAL_07163 TCAL_07163 TCAL_07271 TCAL_07271 TCAL_04923 TCAL_04923 TCAL_12503 TCAL_12503 TCAL_03980 TCAL_03980 TCAL_04938 TCAL_04938 TCAL_14357 TCAL_14357 TCAL_08685 TCAL_08685 TCAL_05600 TCAL_05600 TCAL_03991 TCAL_03991 TCAL_05601 TCAL_05601 TCAL_11662 TCAL_11662 TCAL_00862 TCAL_00862 TCAL_02060 TCAL_02060 TCAL_09099 TCAL_09099 TCAL_07452 TCAL_07452 TCAL_08406 TCAL_08406 TCAL_08875 TCAL_08875 TCAL_09257 TCAL_09257 TCAL_12546 TCAL_12546 TCAL_11142 TCAL_11142 TCAL_06673 TCAL_06673 TCAL_05696 TCAL_05696 TCAL_03694 TCAL_03694 TCAL_14937 TCAL_14937 TCAL_01777 TCAL_01777 TCAL_12806 TCAL_12806 TCAL_17168 TCAL_17168 TCAL_03693 TCAL_03693 TCAL_10922 TCAL_10922 TCAL_14932 TCAL_14932 TCAL_09519 TCAL_09519 TCAL_01439 TCAL_01439 TCAL_09794 TCAL_09794 TCAL_09938 TCAL_09938 TFB1 TFB1 TCAL_06166 TCAL_06166 TCAL_07833 TCAL_07833 TCAL_16988 TCAL_16988 TCAL_10361 TCAL_10361 TCAL_10567 TCAL_10567 TCAL_00081 TCAL_00081 TCAL_04035 TCAL_04035 TCAL_00029 TCAL_00029 TCAL_00028 TCAL_00028 TCAL_15913 TCAL_15913 TCAL_12030 TCAL_12030 TCAL_10627 TCAL_10627 TCAL_00142 TCAL_00142 TCAL_01104 TCAL_01104 TCAL_01105 TCAL_01105 TCAL_12661 TCAL_12661 EIF6 EIF6 TCAL_06508 TCAL_06508 TCAL_14852 TCAL_14852 TCAL_04750 TCAL_04750 TCAL_08157 TCAL_08157 TCAL_03413 TCAL_03413 TCAL_17329 TCAL_17329 TCAL_13683 TCAL_13683 TCAL_01170 TCAL_01170 TCAL_02407 TCAL_02407 TCAL_02448 TCAL_02448 TCAL_02449 TCAL_02449 TCAL_05451 TCAL_05451 TCAL_01218 TCAL_01218 TCAL_04816 TCAL_04816 TCAL_04872 TCAL_04872 TCAL_04879 TCAL_04879 TCAL_04837 TCAL_04837 TCAL_13200 TCAL_13200 TCAL_05436 TCAL_05436 TCAL_09684 TCAL_09684 TCAL_02864 TCAL_02864 TCAL_02867 TCAL_02867 TCAL_02875 TCAL_02875 TCAL_02325 TCAL_02325 TCAL_02828 TCAL_02828 TCAL_02385 TCAL_02385 TCAL_06529 TCAL_06529 TCAL_06523 TCAL_06523 TCAL_06528 TCAL_06528 TCAL_09417 TCAL_09417 TCAL_09413 TCAL_09413 TCAL_06141 TCAL_06141 TCAL_11373 TCAL_11373 TCAL_07534 TCAL_07534 TCAL_07517 TCAL_07517 TCAL_01208 TCAL_01208 TCAL_10016 TCAL_10016 TCAL_02827 TCAL_02827 TCAL_11983 TCAL_11983 TCAL_10195 TCAL_10195 TCAL_12571 TCAL_12571 TCAL_13328 TCAL_13328 TCAL_12791 TCAL_12791 TCAL_01430 TCAL_01430 TCAL_09657 TCAL_09657 TCAL_04155 TCAL_04155 TCAL_08083 TCAL_08083 TCAL_11652 TCAL_11652 TCAL_06826 TCAL_06826 TCAL_16532 TCAL_16532 TCAL_01417 TCAL_01417 TCAL_11274 TCAL_11274 TCAL_01387 TCAL_01387 TCAL_02509 TCAL_02509 TCAL_12211 TCAL_12211 TCAL_01400 TCAL_01400 TCAL_08074 TCAL_08074 TCAL_03802 TCAL_03802 TCAL_07477 TCAL_07477 TCAL_02936 TCAL_02936 TCAL_16949 TCAL_16949 TCAL_12086 TCAL_12086 TCAL_13158 TCAL_13158 TCAL_16929 TCAL_16929 TCAL_07211 TCAL_07211
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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TCAL_14705Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (225 aa)
TCAL_04034U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (617 aa)
TCAL_08550Kri1_C domain-containing protein. (745 aa)
TCAL_00158Protein MAK16 homolog; Belongs to the MAK16 family. (306 aa)
TCAL_11351Uncharacterized protein. (584 aa)
TCAL_11392Uncharacterized protein. (430 aa)
TCAL_04061CSP domain-containing protein. (106 aa)
TCAL_00033Ipi1_N domain-containing protein. (542 aa)
TCAL_03848Uncharacterized protein. (663 aa)
TCAL_00017SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (497 aa)
TCAL_03516RNA helicase. (627 aa)
TCAL_09367tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (888 aa)
TCAL_00612Uncharacterized protein. (321 aa)
TCAL_08566Uncharacterized protein. (64 aa)
TCAL_08565Uncharacterized protein. (307 aa)
TCAL_00499Uncharacterized protein. (1064 aa)
TCAL_00521PSP domain-containing protein. (456 aa)
TCAL_00540Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (306 aa)
TCAL_06410Bms1-type G domain-containing protein. (834 aa)
TCAL_11248Uncharacterized protein. (370 aa)
TCAL_06345RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1036 aa)
TCAL_01659Uncharacterized protein. (950 aa)
TCAL_01310Uncharacterized protein. (885 aa)
TCAL_09861Methyltransf_11 domain-containing protein. (130 aa)
TCAL_10432Uncharacterized protein. (703 aa)
TCAL_14583RLI domain-containing protein. (168 aa)
TCAL_14585Ribo_biogen_C domain-containing protein. (113 aa)
TCAL_01668CLP1_P domain-containing protein. (655 aa)
TCAL_16850NUC153 domain-containing protein. (406 aa)
TCAL_14584Ribo_biogen_C domain-containing protein. (76 aa)
TCAL_06329Uncharacterized protein. (502 aa)
TCAL_04538Uncharacterized protein. (338 aa)
TCAL_07111DNA_binding_1 domain-containing protein. (510 aa)
TCAL_09194S1 motif domain-containing protein. (299 aa)
TCAL_00734Brix domain-containing protein. (583 aa)
TCAL_09515Uncharacterized protein. (258 aa)
TCAL_00730WD_REPEATS_REGION domain-containing protein. (432 aa)
TCAL_00552Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (584 aa)
TCAL_09185Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (858 aa)
TCAL_11251NUC153 domain-containing protein. (688 aa)
TCAL_00692Uncharacterized protein. (1001 aa)
TCAL_15679Uncharacterized protein. (643 aa)
TCAL_13722Nudix hydrolase domain-containing protein. (602 aa)
TCAL_10094Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1582 aa)
TCAL_10092Uncharacterized protein. (613 aa)
TCAL_01300WD_REPEATS_REGION domain-containing protein. (449 aa)
TCAL_04609RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (431 aa)
TCAL_05060Uncharacterized protein. (615 aa)
TCAL_06698Uncharacterized protein. (380 aa)
TCAL_02578WD_REPEATS_REGION domain-containing protein. (561 aa)
TCAL_02552Uncharacterized protein. (1919 aa)
TCAL_00974Uncharacterized protein. (1012 aa)
TCAL_00913Uncharacterized protein. (662 aa)
TCAL_01865Brix domain-containing protein. (404 aa)
TCAL_05838Uncharacterized protein. (359 aa)
TCAL_14657Uncharacterized protein. (611 aa)
TCAL_06975Uncharacterized protein. (1677 aa)
TCAL_05542PseudoU_synth_2 domain-containing protein. (305 aa)
TCAL_15786Uncharacterized protein. (230 aa)
TCAL_02561Uncharacterized protein. (999 aa)
TCAL_08178WD_REPEATS_REGION domain-containing protein. (1790 aa)
TCAL_02201Uncharacterized protein. (1144 aa)
TCAL_00967Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (403 aa)
TCAL_12909Methyltransf_11 domain-containing protein. (2210 aa)
TCAL_06718Uncharacterized protein. (988 aa)
TCAL_06716Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
TCAL_10604Uncharacterized protein. (260 aa)
TCAL_13230Nop domain-containing protein. (463 aa)
TCAL_06726tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. (258 aa)
TCAL_10388ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (809 aa)
TCAL_03963Beta-Casp domain-containing protein. (679 aa)
TCAL_01022Uncharacterized protein. (693 aa)
TCAL_13629RNase_PH domain-containing protein. (281 aa)
TCAL_04744Uncharacterized protein. (239 aa)
TCAL_11453Uncharacterized protein. (1190 aa)
TCAL_08454Uncharacterized protein. (927 aa)
TCAL_14894Uncharacterized protein. (322 aa)
TCAL_09053RRM domain-containing protein. (782 aa)
TCAL_01106ANK_REP_REGION domain-containing protein. (2015 aa)
TCAL_10596Uncharacterized protein. (282 aa)
TCAL_02259Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (481 aa)
TCAL_10044Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (337 aa)
TCAL_06607RIO domain-containing protein. (984 aa)
TCAL_07300Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (338 aa)
TCAL_06602RNase_PH domain-containing protein. (221 aa)
TCAL_05003PlsC domain-containing protein. (990 aa)
TCAL_15309Uncharacterized protein. (160 aa)
TCAL_01749CTCHY-type domain-containing protein. (436 aa)
TCAL_12932Uncharacterized protein. (286 aa)
TCAL_07842Uncharacterized protein. (382 aa)
TCAL_10660DUF2428 domain-containing protein. (1611 aa)
TCAL_04243DOT1 domain-containing protein. (187 aa)
TCAL_06763UPF0020 domain-containing protein. (698 aa)
TCAL_04267S5A_REDUCTASE domain-containing protein. (540 aa)
TCAL_15332Uncharacterized protein. (208 aa)
TCAL_09762Peptidyl-prolyl cis-trans isomerase. (129 aa)
TCAL_07046Sas10 domain-containing protein. (578 aa)
TCAL_07214Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (792 aa)
TCAL_02940Uncharacterized protein. (375 aa)
TCAL_02301SAM-dependent MTase TRM10-type domain-containing protein. (288 aa)
TCAL_04369CMP/dCMP-type deaminase domain-containing protein. (275 aa)
TCAL_05521Uncharacterized protein. (804 aa)
TCAL_02755TsaA-like domain-containing protein. (334 aa)
TCAL_02956Uncharacterized protein. (947 aa)
TCAL_11445Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1107 aa)
TCAL_15069Uncharacterized protein. (144 aa)
TCAL_11721Uncharacterized protein; Belongs to the DEAD box helicase family. (599 aa)
TCAL_03570Uncharacterized protein. (277 aa)
TCAL_03578Uncharacterized protein. (1226 aa)
TCAL_06868Uncharacterized protein. (1357 aa)
TCAL_00804Ribosomal_L7Ae domain-containing protein. (152 aa)
TCAL_03600WD_REPEATS_REGION domain-containing protein. (987 aa)
TCAL_00356U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (251 aa)
TCAL_00355PUA domain-containing protein. (503 aa)
TCAL_06272H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (213 aa)
TCAL_00336KH domain-containing protein. (555 aa)
TCAL_07713Bms1-type G domain-containing protein. (1218 aa)
TCAL_00784Lactamase_B domain-containing protein. (858 aa)
TCAL_02073Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4537 aa)
TCAL_02136Hflx-type G domain-containing protein. (501 aa)
TCAL_02132Uncharacterized protein. (357 aa)
TCAL_17439Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
TCAL_07460Uncharacterized protein. (381 aa)
TCAL_03581Uncharacterized protein. (62 aa)
TCAL_00878Uncharacterized protein; Belongs to the DEAD box helicase family. (719 aa)
TCAL_14298Uncharacterized protein. (251 aa)
TCAL_06861Uncharacterized protein. (257 aa)
TCAL_00373Uncharacterized protein. (644 aa)
TCAL_04901Uncharacterized protein. (294 aa)
TCAL_07294FHA domain-containing protein. (236 aa)
TCAL_08201zf-LYAR domain-containing protein. (327 aa)
TCAL_13732Uncharacterized protein. (261 aa)
TCAL_07137HTH La-type RNA-binding domain-containing protein. (326 aa)
TCAL_08696tRNA (guanine(26)-N(2))-dimethyltransferase. (552 aa)
TCAL_17400HTH La-type RNA-binding domain-containing protein. (326 aa)
TCAL_00405Uncharacterized protein. (291 aa)
TCAL_00363Archease domain-containing protein. (160 aa)
TCAL_00382Uncharacterized protein. (1147 aa)
TCAL_02097RRM domain-containing protein. (593 aa)
TCAL_14352tRNA_int_end_N2 domain-containing protein. (418 aa)
TCAL_09032TRUD domain-containing protein. (706 aa)
TCAL_02105Ribosomal_L7Ae domain-containing protein. (265 aa)
TCAL_14371Uncharacterized protein. (277 aa)
TCAL_04650Uncharacterized protein. (150 aa)
TCAL_02609tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (588 aa)
TCAL_07136Uncharacterized protein. (429 aa)
TCAL_04015Brix domain-containing protein. (350 aa)
TCAL_00487SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (641 aa)
TCAL_00482NUC173 domain-containing protein. (1327 aa)
TCAL_03638Methyltranfer_dom domain-containing protein. (362 aa)
TCAL_00861TYW3 domain-containing protein. (546 aa)
TCAL_02027Uncharacterized protein. (602 aa)
TCAL_00320Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (439 aa)
TCAL_00403Uncharacterized protein. (1366 aa)
TCAL_13181DRBM domain-containing protein. (420 aa)
TCAL_03921Uncharacterized protein. (123 aa)
TCAL_07148Utp12 domain-containing protein. (673 aa)
TCAL_10987WD_REPEATS_REGION domain-containing protein. (895 aa)
TCAL_07163Uncharacterized protein. (680 aa)
TCAL_07271WD_REPEATS_REGION domain-containing protein. (615 aa)
TCAL_04923WD_REPEATS_REGION domain-containing protein. (687 aa)
TCAL_12503PseudoU_synth_2 domain-containing protein. (565 aa)
TCAL_03980Uncharacterized protein. (174 aa)
TCAL_04938Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (218 aa)
TCAL_14357Uncharacterized protein. (429 aa)
TCAL_08685DTW domain-containing protein. (625 aa)
TCAL_05600Uncharacterized protein. (1029 aa)
TCAL_03991HIT-type domain-containing protein. (458 aa)
TCAL_05601PseudoU_synth_1 domain-containing protein. (976 aa)
TCAL_11662Exonuclease domain-containing protein. (195 aa)
TCAL_00862Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (281 aa)
TCAL_02060S4 RNA-binding domain-containing protein. (183 aa)
TCAL_09099GIDA_assoc domain-containing protein. (653 aa)
TCAL_07452Uncharacterized protein. (705 aa)
TCAL_08406Elp3 domain-containing protein. (362 aa)
TCAL_0887540S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
TCAL_09257Lactamase_B domain-containing protein. (364 aa)
TCAL_12546PseudoU_synth_2 domain-containing protein. (581 aa)
TCAL_11142Uncharacterized protein. (307 aa)
TCAL_06673Uncharacterized protein. (859 aa)
TCAL_05696Uncharacterized protein. (495 aa)
TCAL_03694RIO domain-containing protein. (489 aa)
TCAL_14937Uncharacterized protein. (517 aa)
TCAL_01777Uncharacterized protein; Belongs to the DEAD box helicase family. (451 aa)
TCAL_12806Uncharacterized protein. (59 aa)
TCAL_17168Uncharacterized protein. (2387 aa)
TCAL_03693Uncharacterized protein. (453 aa)
TCAL_10922Uncharacterized protein. (276 aa)
TCAL_14932Methyltransf_25 domain-containing protein. (518 aa)
TCAL_09519DUF3677 domain-containing protein. (1986 aa)
TCAL_01439Uncharacterized protein. (939 aa)
TCAL_09794Uncharacterized protein. (356 aa)
TCAL_09938Uncharacterized protein. (160 aa)
TFB1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (365 aa)
TCAL_06166FDX-ACB domain-containing protein. (418 aa)
TCAL_07833SAM_MT_TRM5_TYW2 domain-containing protein. (327 aa)
TCAL_16988Uncharacterized protein. (162 aa)
TCAL_10361Peptidase_M22 domain-containing protein. (184 aa)
TCAL_10567Uncharacterized protein. (1087 aa)
TCAL_00081Uncharacterized protein. (726 aa)
TCAL_04035RNA helicase. (809 aa)
TCAL_00029SpoU_methylase domain-containing protein. (185 aa)
TCAL_00028Uncharacterized protein. (1138 aa)
TCAL_15913Uncharacterized protein. (172 aa)
TCAL_12030Uncharacterized protein. (243 aa)
TCAL_10627Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (380 aa)
TCAL_00142tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (429 aa)
TCAL_01104Uncharacterized protein. (841 aa)
TCAL_01105Uncharacterized protein. (398 aa)
TCAL_12661AlbA_2 domain-containing protein. (601 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
TCAL_06508rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (321 aa)
TCAL_14852Uncharacterized protein. (1040 aa)
TCAL_04750Nucleolar protein 6. (641 aa)
TCAL_08157Uncharacterized protein. (996 aa)
TCAL_03413Uncharacterized protein; Belongs to the CGI121/TPRKB family. (189 aa)
TCAL_17329Uncharacterized protein. (199 aa)
TCAL_13683RRP7 domain-containing protein. (142 aa)
TCAL_01170Uncharacterized protein. (317 aa)
TCAL_02407C3H1-type domain-containing protein. (449 aa)
TCAL_02448Uncharacterized protein. (442 aa)
TCAL_02449HIT-type domain-containing protein. (183 aa)
TCAL_05451PHD-type domain-containing protein. (338 aa)
TCAL_01218Brix domain-containing protein. (309 aa)
TCAL_04816PseudoU_synth_2 domain-containing protein. (720 aa)
TCAL_04872tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (965 aa)
TCAL_04879TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (462 aa)
TCAL_04837Brix domain-containing protein. (337 aa)
TCAL_13200Uncharacterized protein. (1513 aa)
TCAL_05436THUMP domain-containing protein. (427 aa)
TCAL_09684KH_dom_type_1 domain-containing protein. (256 aa)
TCAL_02864DALR_1 domain-containing protein. (390 aa)
TCAL_02867Exonuclease domain-containing protein. (640 aa)
TCAL_02875Uncharacterized protein. (165 aa)
TCAL_02325DRBM domain-containing protein. (864 aa)
TCAL_02828NUC194 domain-containing protein. (3160 aa)
TCAL_02385Uncharacterized protein; Belongs to the argonaute family. (1060 aa)
TCAL_06529Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (772 aa)
TCAL_06523Uncharacterized protein. (739 aa)
TCAL_06528tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (361 aa)
TCAL_09417Uncharacterized protein. (481 aa)
TCAL_09413DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
TCAL_06141WD_REPEATS_REGION domain-containing protein. (286 aa)
TCAL_11373Uncharacterized protein. (165 aa)
TCAL_07534Uncharacterized protein. (1202 aa)
TCAL_07517SAM-dependent MTase TRM10-type domain-containing protein. (474 aa)
TCAL_01208Uncharacterized protein. (94 aa)
TCAL_10016C3H1-type domain-containing protein. (569 aa)
TCAL_02827Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (573 aa)
TCAL_11983FHA domain-containing protein. (837 aa)
TCAL_10195Uncharacterized protein. (525 aa)
TCAL_12571Uncharacterized protein. (396 aa)
TCAL_13328Uncharacterized protein. (186 aa)
TCAL_12791Uncharacterized protein. (586 aa)
TCAL_01430Queuosine salvage protein; Involved in salvaging queuosine. (367 aa)
TCAL_09657tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (310 aa)
TCAL_04155Nop domain-containing protein. (505 aa)
TCAL_08083Formyl_trans_N domain-containing protein. (232 aa)
TCAL_11652Uncharacterized protein. (1432 aa)
TCAL_06826Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (330 aa)
TCAL_16532FtsJ domain-containing protein. (241 aa)
TCAL_01417S4 RNA-binding domain-containing protein. (510 aa)
TCAL_11274Methyltransf_11 domain-containing protein. (455 aa)
TCAL_01387Exonuclease domain-containing protein. (381 aa)
TCAL_02509WD_REPEATS_REGION domain-containing protein. (1665 aa)
TCAL_12211Peptidase_M24 domain-containing protein. (400 aa)
TCAL_01400Rhodanese domain-containing protein. (541 aa)
TCAL_08074Uncharacterized protein. (1666 aa)
TCAL_03802BP28CT domain-containing protein. (2057 aa)
TCAL_07477PPR_long domain-containing protein. (628 aa)
TCAL_02936Uncharacterized protein; Belongs to the DEAD box helicase family. (466 aa)
TCAL_16949Uncharacterized protein. (209 aa)
TCAL_12086Uncharacterized protein. (796 aa)
TCAL_13158SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (886 aa)
TCAL_16929RIX1 domain-containing protein. (756 aa)
TCAL_07211Uncharacterized protein. (829 aa)
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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