STRINGSTRING
TCAL_06304 TCAL_06304 TCAL_05790 TCAL_05790 TCAL_15224 TCAL_15224 TCAL_03900 TCAL_03900 TCAL_01227 TCAL_01227 TCAL_13065 TCAL_13065 TCAL_00196 TCAL_00196 TCAL_04036 TCAL_04036 TCAL_06950 TCAL_06950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCAL_06304Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (278 aa)
TCAL_05790Uncharacterized protein. (457 aa)
TCAL_15224Uncharacterized protein. (1141 aa)
TCAL_03900Aminotran_1_2 domain-containing protein. (560 aa)
TCAL_01227Aminotran_1_2 domain-containing protein. (548 aa)
TCAL_13065DAGKc domain-containing protein. (565 aa)
TCAL_00196DAGKc domain-containing protein. (689 aa)
TCAL_04036Uncharacterized protein. (266 aa)
TCAL_06950Aminotran_1_2 domain-containing protein. (522 aa)
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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