51 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_03602	Protein kinase domain-containing protein. (695 aa)
	TCAL_03618	F5/8 type C domain-containing protein. (424 aa)
	TCAL_10325	Protein kinase domain-containing protein. (370 aa)
	TCAL_02313	Uncharacterized protein. (987 aa)
	TCAL_16955	Uncharacterized protein. (187 aa)
	TCAL_16954	Recep_L_domain domain-containing protein. (101 aa)
	TCAL_09701	Uncharacterized protein. (1702 aa)
	TCAL_03751	Uncharacterized protein. (668 aa)
	TCAL_01380	Alpha-type protein kinase domain-containing protein. (748 aa)
	TCAL_08883	Uncharacterized protein. (1216 aa)
	TCAL_08901	Protein kinase domain-containing protein. (693 aa)
	TCAL_05075	Uncharacterized protein. (1699 aa)
	TCAL_06492	Protein kinase domain-containing protein. (484 aa)
	TCAL_15089	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (567 aa)
	TCAL_10059	Uncharacterized protein. (9067 aa)
	TCAL_02387	Protein kinase domain-containing protein. (421 aa)
	TCAL_02386	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (383 aa)
	TCAL_10319	Protein kinase domain-containing protein. (996 aa)
	TCAL_15052	Protein kinase domain-containing protein. (183 aa)
	TCAL_04815	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (360 aa)
	TCAL_11003	Uncharacterized protein. (2078 aa)
	TCAL_07376	Protein kinase domain-containing protein. (473 aa)
	TCAL_05975	Protein kinase domain-containing protein. (818 aa)
	TCAL_06594	Protein kinase domain-containing protein. (1128 aa)
	TCAL_13635	Protein kinase domain-containing protein. (753 aa)
	TCAL_01677	Uncharacterized protein. (1027 aa)
	TCAL_08516	Uncharacterized protein. (1549 aa)
	TCAL_12857	Uncharacterized protein. (464 aa)
	TCAL_12666	Uncharacterized protein. (260 aa)
	TCAL_01094	Protein kinase domain-containing protein. (775 aa)
	TCAL_12496	Uncharacterized protein. (618 aa)
	TCAL_12495	Uncharacterized protein. (542 aa)
	TCAL_15059	Protein kinase domain-containing protein. (650 aa)
	TCAL_08249	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (382 aa)
	TCAL_06641	Uncharacterized protein. (691 aa)
	TCAL_08671	Non-specific serine/threonine protein kinase. (648 aa)
	TCAL_09750	Protein kinase domain-containing protein. (546 aa)
	TCAL_08306	Protein kinase domain-containing protein. (521 aa)
	TCAL_00714	Protein kinase domain-containing protein. (695 aa)
	TCAL_03897	FABD domain-containing protein. (981 aa)
	TCAL_11041	Semialdhyde_dh domain-containing protein. (443 aa)
	TCAL_03636	Uncharacterized protein. (1193 aa)
	TCAL_01666	Protein kinase domain-containing protein. (820 aa)
	TCAL_01905	Protein kinase domain-containing protein. (408 aa)
	TCAL_02560	Nucleoside diphosphate kinase. (152 aa)
	TCAL_00900	Protein kinase domain-containing protein. (1233 aa)
	TCAL_11300	Uncharacterized protein. (1527 aa)
	TCAL_05714	Protein kinase domain-containing protein. (746 aa)
	TCAL_06241	Protein kinase domain-containing protein. (744 aa)
	TCAL_11508	Protein kinase domain-containing protein. (806 aa)
	TCAL_11510	Protein kinase domain-containing protein. (979 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00714	TCAL_08249	A0A553PAF2	A0A553P042	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.609
TCAL_00714	TCAL_08671	A0A553PAF2	A0A553PDF5	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.667
TCAL_00714	TCAL_12495	A0A553PAF2	A0A553P1G9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.445
TCAL_00714	TCAL_12496	A0A553PAF2	A0A553P1H2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.445
TCAL_00900	TCAL_02313	A0A553P5Y7	A0A553NNN4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.407
TCAL_00900	TCAL_02386	A0A553P5Y7	A0A553NYE9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.469
TCAL_00900	TCAL_03636	A0A553P5Y7	A0A553NE93	Protein kinase domain-containing protein.	Uncharacterized protein.	0.639
TCAL_00900	TCAL_06492	A0A553P5Y7	A0A553PTP6	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.558
TCAL_00900	TCAL_08306	A0A553P5Y7	A0A553PC58	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.704
TCAL_00900	TCAL_09701	A0A553P5Y7	A0A553NPD9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.414
TCAL_01666	TCAL_09750	A0A553P9Y7	A0A553PCJ3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.922
TCAL_01677	TCAL_01905	A0A553PL82	A0A553P855	Uncharacterized protein.	Protein kinase domain-containing protein.	0.525
TCAL_01677	TCAL_02313	A0A553PL82	A0A553NNN4	Uncharacterized protein.	Uncharacterized protein.	0.485
TCAL_01677	TCAL_05714	A0A553PL82	A0A553N6D4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.407
TCAL_01677	TCAL_08883	A0A553PL82	A0A553NT88	Uncharacterized protein.	Uncharacterized protein.	0.453
TCAL_01905	TCAL_01677	A0A553P855	A0A553PL82	Protein kinase domain-containing protein.	Uncharacterized protein.	0.525
TCAL_01905	TCAL_02387	A0A553P855	A0A553NYE3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.466
TCAL_01905	TCAL_03751	A0A553P855	A0A553NPX1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.570
TCAL_01905	TCAL_08249	A0A553P855	A0A553P042	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.476
TCAL_02313	TCAL_00900	A0A553NNN4	A0A553P5Y7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.407