41 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_02402	Uncharacterized protein. (1018 aa)
	TCAL_01227	Aminotran_1_2 domain-containing protein. (548 aa)
	TCAL_15014	Uncharacterized protein. (356 aa)
	TCAL_13985	TLC domain-containing protein. (370 aa)
	TCAL_03235	Uncharacterized protein. (240 aa)
	TCAL_03900	Aminotran_1_2 domain-containing protein. (560 aa)
	TCAL_14295	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (335 aa)
	TCAL_15224	Uncharacterized protein. (1141 aa)
	TCAL_00407	acidPPc domain-containing protein. (379 aa)
	TCAL_13105	Uncharacterized protein. (595 aa)
	TCAL_10992	acidPPc domain-containing protein. (329 aa)
	TCAL_02158	acidPPc domain-containing protein. (283 aa)
	TCAL_07798	PAP2_C domain-containing protein. (505 aa)
	TCAL_06304	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (278 aa)
	TCAL_04807	Uncharacterized protein. (853 aa)
	TCAL_14828	Uncharacterized protein. (70 aa)
	TCAL_08326	Uncharacterized protein. (367 aa)
	TCAL_11732	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)
	TCAL_05790	Uncharacterized protein. (457 aa)
	TCAL_06070	Uncharacterized protein. (473 aa)
	TCAL_15325	LINES_N domain-containing protein. (543 aa)
	TCAL_11601	PAP2_C domain-containing protein. (378 aa)
	TCAL_06621	Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily. (366 aa)
	TCAL_06461	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (491 aa)
	TCAL_06162	Protein kinase domain-containing protein. (593 aa)
	TCAL_06950	Aminotran_1_2 domain-containing protein. (522 aa)
	TCAL_06953	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (500 aa)
	TCAL_04036	Uncharacterized protein. (266 aa)
	TCAL_16003	PAP2_C domain-containing protein. (502 aa)
	TCAL_06952	TLC domain-containing protein. (360 aa)
	TCAL_11861	PH domain-containing protein. (549 aa)
	TCAL_04505	MFS domain-containing protein. (582 aa)
	TCAL_07502	MFS domain-containing protein. (493 aa)
	TCAL_04534	Uncharacterized protein. (351 aa)
	TCAL_02554	PPM-type phosphatase domain-containing protein. (530 aa)
	TCAL_10163	GLTP domain-containing protein. (244 aa)
	TCAL_01150	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (274 aa)
	TCAL_00196	DAGKc domain-containing protein. (689 aa)
	TCAL_03949	Uncharacterized protein. (480 aa)
	TCAL_13065	DAGKc domain-containing protein. (565 aa)
	TCAL_01178	MFS domain-containing protein. (601 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00196	TCAL_00407	A0A553P4F5	A0A553NDH6	DAGKc domain-containing protein.	acidPPc domain-containing protein.	0.563
TCAL_00196	TCAL_01150	A0A553P4F5	A0A553P4Q1	DAGKc domain-containing protein.	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	0.794
TCAL_00196	TCAL_02158	A0A553P4F5	A0A553N9F6	DAGKc domain-containing protein.	acidPPc domain-containing protein.	0.562
TCAL_00196	TCAL_03949	A0A553P4F5	A0A553P398	DAGKc domain-containing protein.	Uncharacterized protein.	0.808
TCAL_00196	TCAL_04534	A0A553P4F5	A0A553PAW5	DAGKc domain-containing protein.	Uncharacterized protein.	0.617
TCAL_00196	TCAL_06070	A0A553P4F5	A0A553PNM8	DAGKc domain-containing protein.	Uncharacterized protein.	0.808
TCAL_00196	TCAL_06304	A0A553P4F5	A0A553PSS9	DAGKc domain-containing protein.	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	0.656
TCAL_00196	TCAL_06621	A0A553P4F5	A0A553PK54	DAGKc domain-containing protein.	Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.	0.883
TCAL_00196	TCAL_06952	A0A553P4F5	A0A553PFW4	DAGKc domain-containing protein.	TLC domain-containing protein.	0.617
TCAL_00196	TCAL_06953	A0A553P4F5	A0A553PI61	DAGKc domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.433
TCAL_00196	TCAL_08326	A0A553P4F5	A0A553PPU6	DAGKc domain-containing protein.	Uncharacterized protein.	0.617
TCAL_00196	TCAL_10992	A0A553P4F5	A0A553NBE5	DAGKc domain-containing protein.	acidPPc domain-containing protein.	0.569
TCAL_00196	TCAL_11732	A0A553P4F5	A0A553PPI0	DAGKc domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.433
TCAL_00196	TCAL_13985	A0A553P4F5	A0A553NX60	DAGKc domain-containing protein.	TLC domain-containing protein.	0.617
TCAL_00196	TCAL_14295	A0A553P4F5	A0A553NEQ3	DAGKc domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.863
TCAL_00407	TCAL_00196	A0A553NDH6	A0A553P4F5	acidPPc domain-containing protein.	DAGKc domain-containing protein.	0.563
TCAL_00407	TCAL_01150	A0A553NDH6	A0A553P4Q1	acidPPc domain-containing protein.	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.	0.770
TCAL_00407	TCAL_02158	A0A553NDH6	A0A553N9F6	acidPPc domain-containing protein.	acidPPc domain-containing protein.	0.818
TCAL_00407	TCAL_03949	A0A553NDH6	A0A553P398	acidPPc domain-containing protein.	Uncharacterized protein.	0.717
TCAL_00407	TCAL_04036	A0A553NDH6	A0A553PHH5	acidPPc domain-containing protein.	Uncharacterized protein.	0.563