129 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_10140	Uncharacterized protein. (2136 aa)
	TCAL_07790	Uncharacterized protein. (407 aa)
	TCAL_05982	Uncharacterized protein. (1691 aa)
	TCAL_12668	Integrin beta; Belongs to the integrin beta chain family. (809 aa)
	TCAL_07056	WH2 domain-containing protein. (165 aa)
	TCAL_02839	DH domain-containing protein. (1395 aa)
	TCAL_13563	Uncharacterized protein. (205 aa)
	TCAL_01723	Uncharacterized protein. (1350 aa)
	TCAL_01743	Vang-like protein. (594 aa)
	TCAL_04235	V-SNARE coiled-coil homology domain-containing protein. (96 aa)
	TCAL_07165	Uncharacterized protein. (703 aa)
	TCAL_11690	Uncharacterized protein. (1616 aa)
	TCAL_09318	Uncharacterized protein. (989 aa)
	TCAL_16720	Uncharacterized protein. (386 aa)
	TCAL_06622	Uncharacterized protein. (910 aa)
	TCAL_10901	Uncharacterized protein. (1611 aa)
	TCAL_10902	Uncharacterized protein. (176 aa)
	TCAL_11828	Uncharacterized protein. (475 aa)
	TCAL_15972	WH1 domain-containing protein. (831 aa)
	TCAL_09586	WH2 domain-containing protein. (681 aa)
	TCAL_10454	Uncharacterized protein. (384 aa)
	TCAL_07416	Uncharacterized protein. (296 aa)
	TCAL_15926	Rho-GAP domain-containing protein. (1410 aa)
	TCAL_12003	Uncharacterized protein. (1443 aa)
	TCAL_04582	PX domain-containing protein. (476 aa)
	TCAL_04509	Uncharacterized protein; Belongs to the DOCK family. (1935 aa)
	TCAL_00709	Integrin beta. (870 aa)
	TCAL_00684	Uncharacterized protein. (1212 aa)
	TCAL_08306	Protein kinase domain-containing protein. (521 aa)
	TCAL_01671	Uncharacterized protein. (1046 aa)
	TCAL_01660	Uncharacterized protein. (237 aa)
	TCAL_00661	Uncharacterized protein. (459 aa)
	TCAL_07115	Integrin beta; Belongs to the integrin beta chain family. (825 aa)
	TCAL_08310	Uncharacterized protein. (1279 aa)
	TCAL_01618	Uncharacterized protein. (225 aa)
	TCAL_06711	Uncharacterized protein. (975 aa)
	TCAL_02580	Uncharacterized protein. (1215 aa)
	TCAL_07402	Uncharacterized protein. (513 aa)
	TCAL_01948	Rho-GAP domain-containing protein. (713 aa)
	TCAL_10592	Phospholipase. (1154 aa)
	TCAL_03364	Uncharacterized protein. (1027 aa)
	TCAL_01579	Ig-like domain-containing protein. (1275 aa)
	TCAL_15714	Abi_HHR domain-containing protein. (364 aa)
	TCAL_09169	Uncharacterized protein. (1126 aa)
	TCAL_01911	Uncharacterized protein. (475 aa)
	TCAL_01936	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1263 aa)
	TCAL_02568	Uncharacterized protein. (252 aa)
	TCAL_02569	G_PROTEIN_RECEP_F1_2 domain-containing protein. (1348 aa)
	TCAL_10157	Ig-like domain-containing protein. (989 aa)
	TCAL_11987	Uncharacterized protein; Belongs to the MAGUK family. (1099 aa)
	TCAL_17139	Ig-like domain-containing protein. (209 aa)
	TCAL_09959	Uncharacterized protein. (212 aa)
	TCAL_17156	Uncharacterized protein. (459 aa)
	TCAL_06722	Uncharacterized protein. (789 aa)
	TCAL_06727	Uncharacterized protein. (1031 aa)
	TCAL_04760	Uncharacterized protein. (1106 aa)
	TCAL_03969	Uncharacterized protein. (843 aa)
	TCAL_03405	Uncharacterized protein. (975 aa)
	TCAL_14874	Kindlin_2_N domain-containing protein. (70 aa)
	TCAL_11263	Uncharacterized protein. (902 aa)
	TCAL_11266	Uncharacterized protein. (195 aa)
	TCAL_09063	Uncharacterized protein. (220 aa)
	TCAL_13033	Uncharacterized protein. (947 aa)
	TCAL_06098	Uncharacterized protein. (350 aa)
	TCAL_09600	Ig-like domain-containing protein. (171 aa)
	TCAL_09608	Uncharacterized protein. (372 aa)
	TCAL_09961	Fibronectin type-III domain-containing protein. (436 aa)
	TCAL_09601	Uncharacterized protein. (585 aa)
	TCAL_09960	Ig-like domain-containing protein. (405 aa)
	TCAL_08153	WH2 domain-containing protein. (496 aa)
	TCAL_03930	Non-specific serine/threonine protein kinase. (1080 aa)
	TCAL_01071	Uncharacterized protein. (975 aa)
	TCAL_00282	Uncharacterized protein. (1184 aa)
	TCAL_09057	Uncharacterized protein. (779 aa)
	TCAL_16215	Uncharacterized protein. (1086 aa)
	TCAL_04738	Uncharacterized protein. (1183 aa)
	TCAL_04736	Uncharacterized protein. (1136 aa)
	TCAL_03126	Non-specific serine/threonine protein kinase. (744 aa)
	TCAL_11940	Uncharacterized protein. (962 aa)
	TCAL_01110	Uncharacterized protein. (945 aa)
	TCAL_10839	Uncharacterized protein. (190 aa)
	TCAL_12357	RING-type domain-containing protein. (200 aa)
	TCAL_13423	Uncharacterized protein. (181 aa)
	TCAL_04496	Uncharacterized protein. (1349 aa)
	TCAL_11384	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (461 aa)
	TCAL_06641	Uncharacterized protein. (691 aa)
	TCAL_02799	Uncharacterized protein. (1889 aa)
	TCAL_05285	PH domain-containing protein. (667 aa)
	TCAL_02326	Uncharacterized protein. (925 aa)
	TCAL_04461	Uncharacterized protein; Belongs to the DOCK family. (2290 aa)
	TCAL_02329	Uncharacterized protein. (2328 aa)
	TCAL_10295	Rho-GAP domain-containing protein. (812 aa)
	TCAL_09293	Uncharacterized protein; Belongs to the DOCK family. (1848 aa)
	TCAL_17312	Uncharacterized protein. (1189 aa)
	TCAL_04488	Uncharacterized protein. (1154 aa)
	TCAL_02339	Uncharacterized protein. (285 aa)
	TCAL_05064	Rho-GAP domain-containing protein. (1302 aa)
	TCAL_12885	Uncharacterized protein. (1345 aa)
	TCAL_03071	Uncharacterized protein. (204 aa)
	TCAL_10743	Uncharacterized protein. (791 aa)
	TCAL_06847	Uncharacterized protein. (824 aa)
	TCAL_05624	Uncharacterized protein. (190 aa)
	TCAL_06432	Uncharacterized protein. (2014 aa)
	TCAL_02756	DH domain-containing protein. (1503 aa)
	TCAL_03465	Uncharacterized protein. (91 aa)
	TCAL_05499	Uncharacterized protein. (1116 aa)
	TCAL_07818	Uncharacterized protein. (1035 aa)
	TCAL_03108	Uncharacterized protein. (887 aa)
	TCAL_07812	Uncharacterized protein. (805 aa)
	TCAL_06866	Uncharacterized protein. (778 aa)
	TCAL_10255	Uncharacterized protein. (350 aa)
	TCAL_02067	Uncharacterized protein. (842 aa)
	TCAL_03636	Uncharacterized protein. (1193 aa)
	TCAL_04914	Uncharacterized protein. (852 aa)
	TCAL_07950	VPS9 domain-containing protein. (1576 aa)
	TCAL_03553	Uncharacterized protein. (1346 aa)
	TCAL_13592	FH2 domain-containing protein. (1075 aa)
	TCAL_03897	FABD domain-containing protein. (981 aa)
	TCAL_07965	Rho-GAP domain-containing protein. (706 aa)
	TCAL_03642	Uncharacterized protein. (722 aa)
	TCAL_03996	LEM domain-containing protein. (776 aa)
	TCAL_06295	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (199 aa)
	TCAL_02176	Uncharacterized protein. (3194 aa)
	TCAL_16261	Uncharacterized protein. (930 aa)
	TCAL_01780	Calponin-homology (CH) domain-containing protein. (737 aa)
	TCAL_14095	Rho-GAP domain-containing protein. (192 aa)
	TCAL_08466	Uncharacterized protein. (453 aa)
	TCAL_10079	Uncharacterized protein; Belongs to the MAGUK family. (558 aa)
	TCAL_07862	Uncharacterized protein; Belongs to the MAGUK family. (832 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00282	TCAL_02580	A0A553P282	A0A553P8P8	Uncharacterized protein.	Uncharacterized protein.	0.423
TCAL_00661	TCAL_00709	A0A553PBV1	A0A553PCM9	Uncharacterized protein.	Integrin beta.	0.614
TCAL_00661	TCAL_01723	A0A553PBV1	A0A553PML8	Uncharacterized protein.	Uncharacterized protein.	0.726
TCAL_00661	TCAL_01743	A0A553PBV1	A0A553PM81	Uncharacterized protein.	Vang-like protein.	0.524
TCAL_00661	TCAL_01780	A0A553PBV1	A0A553N953	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.683
TCAL_00661	TCAL_01911	A0A553PBV1	A0A553P6K1	Uncharacterized protein.	Uncharacterized protein.	0.432
TCAL_00661	TCAL_01936	A0A553PBV1	A0A553P6G0	Uncharacterized protein.	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.	0.468
TCAL_00661	TCAL_02580	A0A553PBV1	A0A553P8P8	Uncharacterized protein.	Uncharacterized protein.	0.509
TCAL_00661	TCAL_03108	A0A553PBV1	A0A553NNR6	Uncharacterized protein.	Uncharacterized protein.	0.640
TCAL_00661	TCAL_03126	A0A553PBV1	A0A553P1S9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.573
TCAL_00661	TCAL_03465	A0A553PBV1	A0A553NQ70	Uncharacterized protein.	Uncharacterized protein.	0.439
TCAL_00661	TCAL_03553	A0A553PBV1	A0A553ND95	Uncharacterized protein.	Uncharacterized protein.	0.517
TCAL_00661	TCAL_03636	A0A553PBV1	A0A553NE93	Uncharacterized protein.	Uncharacterized protein.	0.646
TCAL_00661	TCAL_03642	A0A553PBV1	A0A553NB78	Uncharacterized protein.	Uncharacterized protein.	0.683
TCAL_00661	TCAL_03897	A0A553PBV1	A0A553NBR6	Uncharacterized protein.	FABD domain-containing protein.	0.550
TCAL_00661	TCAL_03930	A0A553PBV1	A0A553P2L9	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.500
TCAL_00661	TCAL_04496	A0A553PBV1	A0A553P066	Uncharacterized protein.	Uncharacterized protein.	0.439
TCAL_00661	TCAL_04582	A0A553PBV1	A0A553PD94	Uncharacterized protein.	PX domain-containing protein.	0.553
TCAL_00661	TCAL_05499	A0A553PBV1	A0A553NNY8	Uncharacterized protein.	Uncharacterized protein.	0.439
TCAL_00661	TCAL_06641	A0A553PBV1	A0A553NZW8	Uncharacterized protein.	Uncharacterized protein.	0.734