8 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_00342	Uncharacterized protein; Belongs to the peptidase M16 family. (526 aa)
	TCAL_07917	Uncharacterized protein. (456 aa)
	TCAL_06954	Uncharacterized protein. (1074 aa)
	TCAL_11611	Uncharacterized protein; Belongs to the peptidase M16 family. (526 aa)
	TCAL_02496	Uncharacterized protein; Belongs to the peptidase M16 family. (1050 aa)
	TCAL_02934	Uncharacterized protein. (1158 aa)
	TCAL_08216	M16C_associated domain-containing protein. (992 aa)
	TCAL_03614	Uncharacterized protein. (1072 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00342	TCAL_07917	A0A553NCH5	A0A553PI78	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein.	0.554
TCAL_00342	TCAL_08216	A0A553NCH5	A0A553NAZ3	Uncharacterized protein; Belongs to the peptidase M16 family.	M16C_associated domain-containing protein.	0.518
TCAL_00342	TCAL_11611	A0A553NCH5	A0A553PBA4	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.999
TCAL_02496	TCAL_08216	A0A553NTJ7	A0A553NAZ3	Uncharacterized protein; Belongs to the peptidase M16 family.	M16C_associated domain-containing protein.	0.536
TCAL_02934	TCAL_08216	A0A553NP82	A0A553NAZ3	Uncharacterized protein.	M16C_associated domain-containing protein.	0.536
TCAL_07917	TCAL_00342	A0A553PI78	A0A553NCH5	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.554
TCAL_07917	TCAL_11611	A0A553PI78	A0A553PBA4	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.999
TCAL_08216	TCAL_00342	A0A553NAZ3	A0A553NCH5	M16C_associated domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.518
TCAL_08216	TCAL_02496	A0A553NAZ3	A0A553NTJ7	M16C_associated domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.536
TCAL_08216	TCAL_02934	A0A553NAZ3	A0A553NP82	M16C_associated domain-containing protein.	Uncharacterized protein.	0.536
TCAL_08216	TCAL_11611	A0A553NAZ3	A0A553PBA4	M16C_associated domain-containing protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.475
TCAL_11611	TCAL_00342	A0A553PBA4	A0A553NCH5	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.999
TCAL_11611	TCAL_07917	A0A553PBA4	A0A553PI78	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein.	0.999
TCAL_11611	TCAL_08216	A0A553PBA4	A0A553NAZ3	Uncharacterized protein; Belongs to the peptidase M16 family.	M16C_associated domain-containing protein.	0.475