71 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_00234	CMP/dCMP-type deaminase domain-containing protein. (116 aa)
	TCAL_14925	G domain-containing protein. (103 aa)
	TCAL_01771	Uncharacterized protein. (2215 aa)
	TCAL_07433	Uncharacterized protein. (893 aa)
	TCAL_10285	PNP_UDP_1 domain-containing protein. (352 aa)
	TCAL_12531	TLC domain-containing protein. (319 aa)
	TCAL_03189	OBG-type G domain-containing protein. (340 aa)
	TCAL_06262	OMPdecase domain-containing protein. (472 aa)
	TCAL_02112	FHA domain-containing protein. (348 aa)
	TCAL_04007	Uncharacterized protein. (500 aa)
	TCAL_04898	Uridine kinase; Belongs to the uridine kinase family. (269 aa)
	TCAL_10340	Uncharacterized protein. (475 aa)
	TCAL_11165	Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (305 aa)
	TCAL_02077	Thymidylate_kin domain-containing protein. (219 aa)
	TCAL_08228	TLC domain-containing protein. (307 aa)
	TCAL_04631	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (609 aa)
	TCAL_04377	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (192 aa)
	TCAL_05879	Uncharacterized protein. (721 aa)
	TCAL_03085	Nucleoside diphosphate kinase. (440 aa)
	TCAL_05159	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (490 aa)
	TCAL_10474	dNK domain-containing protein. (257 aa)
	TCAL_02306	Uncharacterized protein. (222 aa)
	TCAL_05182	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (591 aa)
	TCAL_05165	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (327 aa)
	TCAL_03481	B30.2/SPRY domain-containing protein. (281 aa)
	TCAL_06840	CN hydrolase domain-containing protein. (385 aa)
	TCAL_03799	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (150 aa)
	TCAL_03052	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)
	TCAL_03817	Uncharacterized protein. (491 aa)
	TCAL_11282	TLC domain-containing protein. (290 aa)
	TCAL_07208	Uncharacterized protein; Belongs to the thymidine kinase family. (321 aa)
	TCAL_04147	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (473 aa)
	TCAL_02384	Uncharacterized protein. (415 aa)
	TCAL_06116	Uridine kinase; Belongs to the uridine kinase family. (600 aa)
	TCAL_10300	Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. (464 aa)
	TCAL_02446	Uncharacterized protein. (858 aa)
	TCAL_02397	NDK domain-containing protein; Belongs to the NDK family. (241 aa)
	TCAL_04776	CC2D2AN-C2 domain-containing protein. (573 aa)
	TCAL_17145	C2 domain-containing protein. (808 aa)
	TCAL_00235	CMP/dCMP-type deaminase domain-containing protein. (197 aa)
	TCAL_04749	PfkB domain-containing protein. (690 aa)
	TCAL_09543	TPR_REGION domain-containing protein. (308 aa)
	TCAL_00967	Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (403 aa)
	TCAL_14047	dUTPase domain-containing protein. (306 aa)
	TCAL_16885	Uncharacterized protein. (1092 aa)
	TCAL_02560	Nucleoside diphosphate kinase. (152 aa)
	TCAL_04605	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (582 aa)
	TCAL_00713	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (631 aa)
	TCAL_14560	Uncharacterized protein; Belongs to the 5'-nucleotidase family. (562 aa)
	TCAL_00744	F-box domain-containing protein. (494 aa)
	TCAL_09737	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (806 aa)
	TCAL_01623	Uncharacterized protein. (500 aa)
	TCAL_00617	Uncharacterized protein. (606 aa)
	TCAL_09361	Uncharacterized protein. (802 aa)
	TCAL_16842	Uncharacterized protein. (225 aa)
	TCAL_00037	Nudix hydrolase domain-containing protein. (262 aa)
	TCAL_12878	Uncharacterized protein. (371 aa)
	TCAL_00154	Uncharacterized protein. (592 aa)
	TCAL_10627	Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (380 aa)
	TCAL_00025	Uncharacterized protein. (1041 aa)
	TCAL_08547	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family. (671 aa)
	TCAL_10198	Uncharacterized protein. (551 aa)
	TCAL_09455	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1045 aa)
	TCAL_04255	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (630 aa)
	TCAL_09041	Uncharacterized protein. (463 aa)
	TCAL_06054	PNP_UDP_1 domain-containing protein. (319 aa)
	TCAL_02261	Uncharacterized protein; Belongs to the GroES chaperonin family. (103 aa)
	TCAL_12624	Uncharacterized protein. (565 aa)
	TCAL_07084	Uncharacterized protein. (722 aa)
	TCAL_13889	dUTPase domain-containing protein. (181 aa)
	TCAL_06501	Uncharacterized protein. (213 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00025	TCAL_01771	A0A553PHD1	A0A553N7P2	Uncharacterized protein.	Uncharacterized protein.	0.982
TCAL_00025	TCAL_06262	A0A553PHD1	A0A553N8X9	Uncharacterized protein.	OMPdecase domain-containing protein.	0.952
TCAL_00025	TCAL_06840	A0A553PHD1	A0A553NSQ0	Uncharacterized protein.	CN hydrolase domain-containing protein.	0.922
TCAL_00025	TCAL_09361	A0A553PHD1	A0A553PDW4	Uncharacterized protein.	Uncharacterized protein.	0.949
TCAL_00025	TCAL_09455	A0A553PHD1	A0A553PK58	Uncharacterized protein.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.985
TCAL_00037	TCAL_02306	A0A553PFF9	A0A553NQ59	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.530
TCAL_00037	TCAL_02397	A0A553PFF9	A0A553P091	Nudix hydrolase domain-containing protein.	NDK domain-containing protein; Belongs to the NDK family.	0.779
TCAL_00037	TCAL_02560	A0A553PFF9	A0A553P6C1	Nudix hydrolase domain-containing protein.	Nucleoside diphosphate kinase.	0.909
TCAL_00037	TCAL_03085	A0A553PFF9	A0A553NP03	Nudix hydrolase domain-containing protein.	Nucleoside diphosphate kinase.	0.909
TCAL_00037	TCAL_03189	A0A553PFF9	A0A553N8W1	Nudix hydrolase domain-containing protein.	OBG-type G domain-containing protein.	0.742
TCAL_00037	TCAL_03799	A0A553PFF9	A0A553NTA9	Nudix hydrolase domain-containing protein.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.593
TCAL_00037	TCAL_04255	A0A553PFF9	A0A553PLI1	Nudix hydrolase domain-containing protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.930
TCAL_00037	TCAL_04377	A0A553PFF9	A0A553NNE3	Nudix hydrolase domain-containing protein.	UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.643
TCAL_00037	TCAL_04605	A0A553PFF9	A0A553P9M6	Nudix hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.436
TCAL_00037	TCAL_04631	A0A553PFF9	A0A553NFH5	Nudix hydrolase domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.436
TCAL_00037	TCAL_04898	A0A553PFF9	A0A553NDJ6	Nudix hydrolase domain-containing protein.	Uridine kinase; Belongs to the uridine kinase family.	0.580
TCAL_00037	TCAL_06054	A0A553PFF9	A0A553PNP6	Nudix hydrolase domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.457
TCAL_00037	TCAL_06116	A0A553PFF9	A0A553NYR5	Nudix hydrolase domain-containing protein.	Uridine kinase; Belongs to the uridine kinase family.	0.530
TCAL_00037	TCAL_07084	A0A553PFF9	A0A553PQE9	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.471
TCAL_00037	TCAL_07433	A0A553PFF9	A0A553N7T7	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.436