49 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_14804	Aminotran_5 domain-containing protein. (153 aa)
	TCAL_17061	Aminotran_5 domain-containing protein. (173 aa)
	TCAL_07357	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (339 aa)
	TCAL_01691	ANK_REP_REGION domain-containing protein. (763 aa)
	TCAL_05015	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (424 aa)
	TCAL_01750	Uncharacterized protein. (772 aa)
	TCAL_09217	Uncharacterized protein. (756 aa)
	TCAL_12270	Aminotran_1_2 domain-containing protein. (387 aa)
	TCAL_01296	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (530 aa)
	TCAL_01274	Amine oxidase. (642 aa)
	TCAL_02222	ANK_REP_REGION domain-containing protein. (667 aa)
	TCAL_14635	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (328 aa)
	TCAL_14636	Uncharacterized protein. (285 aa)
	TCAL_05393	ANK_REP_REGION domain-containing protein. (558 aa)
	TCAL_02444	Glutamine amidotransferase type-2 domain-containing protein. (566 aa)
	TCAL_09685	Glutamine amidotransferase type-2 domain-containing protein. (1951 aa)
	TCAL_01242	ADSL_C domain-containing protein. (866 aa)
	TCAL_04427	Uncharacterized protein. (823 aa)
	TCAL_04170	Uncharacterized protein. (508 aa)
	TCAL_05074	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (704 aa)
	TCAL_04668	Uncharacterized protein. (779 aa)
	TCAL_07680	Uncharacterized protein. (452 aa)
	TCAL_06844	CN hydrolase domain-containing protein. (588 aa)
	TCAL_03805	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (943 aa)
	TCAL_07223	ANK_REP_REGION domain-containing protein. (617 aa)
	TCAL_04376	ANK_REP_REGION domain-containing protein. (690 aa)
	TCAL_10329	Glutamine synthetase. (362 aa)
	TCAL_05594	AAA domain-containing protein; Belongs to the AAA ATPase family. (352 aa)
	TCAL_03613	ANK_REP_REGION domain-containing protein. (512 aa)
	TCAL_03884	Glutamine amidotransferase type-2 domain-containing protein. (582 aa)
	TCAL_05776	DAO domain-containing protein. (351 aa)
	TCAL_11069	Uncharacterized protein. (310 aa)
	TCAL_14985	Aminotran_1_2 domain-containing protein. (570 aa)
	TCAL_17186	Aminotran_1_2 domain-containing protein. (183 aa)
	TCAL_04172	Aspartate aminotransferase. (408 aa)
	TCAL_01771	Uncharacterized protein. (2215 aa)
	TCAL_01756	Uncharacterized protein. (701 aa)
	TCAL_12968	Aspartate aminotransferase. (485 aa)
	TCAL_13213	Aspartate aminotransferase. (408 aa)
	TCAL_09280	Uncharacterized protein. (717 aa)
	TCAL_06490	Nfu_N domain-containing protein. (273 aa)
	TCAL_13735	Uncharacterized protein. (124 aa)
	TCAL_17457	Uncharacterized protein. (740 aa)
	TCAL_13055	Amine oxidase. (534 aa)
	TCAL_10724	DAO domain-containing protein. (345 aa)
	TCAL_04806	Uncharacterized protein. (673 aa)
	TCAL_04316	ANK_REP_REGION domain-containing protein. (494 aa)
	TCAL_14805	Uncharacterized protein. (79 aa)
	TCAL_11000	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (611 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_01242	TCAL_01771	A0A553NWY7	A0A553N7P2	ADSL_C domain-containing protein.	Uncharacterized protein.	0.923
TCAL_01242	TCAL_02444	A0A553NWY7	A0A553NZY0	ADSL_C domain-containing protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.482
TCAL_01242	TCAL_03805	A0A553NWY7	A0A553NSB1	ADSL_C domain-containing protein.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.401
TCAL_01242	TCAL_03884	A0A553NWY7	A0A553NCU6	ADSL_C domain-containing protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.482
TCAL_01242	TCAL_05015	A0A553NWY7	A0A553PKV4	ADSL_C domain-containing protein.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.999
TCAL_01242	TCAL_06844	A0A553NWY7	A0A553NSS1	ADSL_C domain-containing protein.	CN hydrolase domain-containing protein.	0.563
TCAL_01242	TCAL_09685	A0A553NWY7	A0A553NZ06	ADSL_C domain-containing protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.640
TCAL_01242	TCAL_10329	A0A553NWY7	A0A553NFF0	ADSL_C domain-containing protein.	Glutamine synthetase.	0.659
TCAL_01242	TCAL_12968	A0A553NWY7	A0A553N687	ADSL_C domain-containing protein.	Aspartate aminotransferase.	0.400
TCAL_01274	TCAL_01771	A0A553PDA0	A0A553N7P2	Amine oxidase.	Uncharacterized protein.	0.675
TCAL_01274	TCAL_04170	A0A553PDA0	A0A553NU31	Amine oxidase.	Uncharacterized protein.	0.497
TCAL_01274	TCAL_05015	A0A553PDA0	A0A553PKV4	Amine oxidase.	Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.	0.667
TCAL_01274	TCAL_06844	A0A553PDA0	A0A553NSS1	Amine oxidase.	CN hydrolase domain-containing protein.	0.635
TCAL_01296	TCAL_02444	A0A553PDN4	A0A553NZY0	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamine amidotransferase type-2 domain-containing protein.	0.531
TCAL_01296	TCAL_03805	A0A553PDN4	A0A553NSB1	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.773
TCAL_01296	TCAL_03884	A0A553PDN4	A0A553NCU6	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamine amidotransferase type-2 domain-containing protein.	0.531
TCAL_01296	TCAL_04170	A0A553PDN4	A0A553NU31	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.932
TCAL_01296	TCAL_05074	A0A553PDN4	A0A553NTV6	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.970
TCAL_01296	TCAL_05776	A0A553PDN4	A0A553NCS8	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	DAO domain-containing protein.	0.424
TCAL_01296	TCAL_06844	A0A553PDN4	A0A553NSS1	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	CN hydrolase domain-containing protein.	0.603