(125 nodes) Phagosome network (Tigriopus californicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_03168	Uncharacterized protein. (283 aa)
	TCAL_05687	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (116 aa)
	TCAL_01298	Uncharacterized protein. (376 aa)
	TCAL_01469	Uncharacterized protein. (383 aa)
	TCAL_09132	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (531 aa)
	TCAL_01442	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (202 aa)
	TCAL_07446	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	TCAL_13849	Uncharacterized protein. (174 aa)
	TCAL_07448	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	TCAL_01766	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family. (211 aa)
	TCAL_10640	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	TCAL_04395	Uncharacterized protein. (657 aa)
	TCAL_07973	Uncharacterized protein; Belongs to the CD36 family. (521 aa)
	TCAL_13790	Tr-type G domain-containing protein. (643 aa)
	TCAL_04197	Uncharacterized protein. (278 aa)
	TCAL_00471	Uncharacterized protein. (376 aa)
	TCAL_00470	Uncharacterized protein. (376 aa)
	TCAL_08690	Uncharacterized protein. (252 aa)
	TCAL_11586	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (306 aa)
	TCAL_08207	Uncharacterized protein. (299 aa)
	TCAL_00422	zf-Tim10_DDP domain-containing protein. (114 aa)
	TCAL_02090	Uncharacterized protein. (4571 aa)
	TCAL_05778	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (401 aa)
	TCAL_04022	Fe2OG dioxygenase domain-containing protein. (308 aa)
	TCAL_10343	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (561 aa)
	TCAL_11040	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (496 aa)
	TCAL_07699	Uncharacterized protein; Belongs to the actin family. (376 aa)
	TCAL_09082	Uncharacterized protein. (486 aa)
	TCAL_02950	Uncharacterized protein. (196 aa)
	TCAL_09234	Phosphatidylinositol 3-kinase catalytic subunit type 3. (669 aa)
	TCAL_08043	Deacetylase sirtuin-type domain-containing protein. (517 aa)
	TCAL_05969	WD_REPEATS_REGION domain-containing protein. (748 aa)
	TCAL_02936	Uncharacterized protein; Belongs to the DEAD box helicase family. (466 aa)
	TCAL_03823	Uncharacterized protein; Belongs to the actin family. (439 aa)
	TCAL_03013	Uncharacterized protein. (601 aa)
	TCAL_15102	Uncharacterized protein. (96 aa)
	TCAL_11657	Coronin; Belongs to the WD repeat coronin family. (630 aa)
	TCAL_12894	Uncharacterized protein. (322 aa)
	TCAL_12014	Uncharacterized protein. (337 aa)
	TCAL_04689	Uncharacterized protein. (68 aa)
	TCAL_09872	Uncharacterized protein. (376 aa)
	TCAL_03269	Uncharacterized protein. (693 aa)
	TCAL_05284	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (459 aa)
	TCAL_01202	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (454 aa)
	TCAL_06655	Uncharacterized protein. (7647 aa)
	TCAL_01168	Uncharacterized protein. (194 aa)
	TCAL_01164	Plug_translocon domain-containing protein. (473 aa)
	TCAL_06527	Uncharacterized protein; Belongs to the CD36 family. (547 aa)
	TCAL_12629	Coronin; Belongs to the WD repeat coronin family. (519 aa)
	TCAL_04838	Uncharacterized protein. (492 aa)
	TCAL_02844	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (276 aa)
	TCAL_05451	PHD-type domain-containing protein. (338 aa)
	TCAL_10066	BTB domain-containing protein. (1079 aa)
	TCAL_01258	Uncharacterized protein; Belongs to the tubulin family. (671 aa)
	TCAL_11967	V-ATPase_H_C domain-containing protein. (193 aa)
	TCAL_14882	Uncharacterized protein. (464 aa)
	TCAL_03410	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (960 aa)
	TCAL_09726	Uncharacterized protein. (979 aa)
	TCAL_03967	Uncharacterized protein. (143 aa)
	TCAL_03156	Uncharacterized protein. (1396 aa)
	TCAL_01129	Uncharacterized protein. (192 aa)
	TCAL_01126	Uncharacterized protein. (615 aa)
	TCAL_10601	Uncharacterized protein; Belongs to the tubulin family. (363 aa)
	TCAL_03968	Uncharacterized protein. (180 aa)
	TCAL_00212	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	TCAL_11458	Arm_2 domain-containing protein. (386 aa)
	TCAL_03966	Uncharacterized protein. (197 aa)
	TCAL_05549	Uncharacterized protein. (219 aa)
	TCAL_13306	PHD-type domain-containing protein. (671 aa)
	TCAL_08803	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (385 aa)
	TCAL_01952	WD_REPEATS_REGION domain-containing protein. (511 aa)
	TCAL_00946	YccV-like domain-containing protein. (632 aa)
	TCAL_03365	Uncharacterized protein; Belongs to the CD36 family. (636 aa)
	TCAL_03367	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (155 aa)
	TCAL_10593	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (408 aa)
	TCAL_01923	Uncharacterized protein; Belongs to the CD36 family. (549 aa)
	TCAL_01618	Uncharacterized protein. (225 aa)
	TCAL_07115	Integrin beta; Belongs to the integrin beta chain family. (825 aa)
	TCAL_05666	WD_REPEATS_REGION domain-containing protein. (710 aa)
	TCAL_04519	Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
	TCAL_08665	Uncharacterized protein; Belongs to the CD36 family. (601 aa)
	TCAL_08574	Uncharacterized protein. (4146 aa)
	TCAL_00687	Uncharacterized protein. (663 aa)
	TCAL_01332	Uncharacterized protein. (283 aa)
	TCAL_00686	Uncharacterized protein. (131 aa)
	TCAL_09500	Calreticulin. (399 aa)
	TCAL_00709	Integrin beta. (870 aa)
	TCAL_06414	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (884 aa)
	TCAL_04525	Uncharacterized protein. (189 aa)
	TCAL_08670	Uncharacterized protein. (230 aa)
	TCAL_08673	Uncharacterized protein; Belongs to the CD36 family. (500 aa)
	TCAL_08651	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	TCAL_01299	Uncharacterized protein. (575 aa)
	TCAL_02655	Uncharacterized protein; Belongs to the CD36 family. (991 aa)
	TCAL_13562	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (444 aa)
	TCAL_11400	Poly [ADP-ribose] polymerase. (1344 aa)
	TCAL_04054	Uncharacterized protein. (1258 aa)
	TCAL_07597	Uncharacterized protein; Belongs to the synaptobrevin family. (214 aa)
	TCAL_02682	Uncharacterized protein. (83 aa)
	TCAL_06376	Uncharacterized protein; Belongs to the peptidase C1 family. (332 aa)
	TCAL_15958	Uncharacterized protein; Belongs to the peptidase C1 family. (1325 aa)
	TCAL_04033	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (456 aa)
	TCAL_05315	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (212 aa)
	TCAL_08793	Uncharacterized protein. (191 aa)
	TCAL_15389	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (203 aa)
	TCAL_13724	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (1128 aa)
	TCAL_06164	Uncharacterized protein; Belongs to the peptidase C1 family. (329 aa)
	TCAL_12046	Uncharacterized protein. (285 aa)
	TCAL_09784	Uncharacterized protein; Belongs to the CD36 family. (576 aa)
	TCAL_08767	t-SNARE coiled-coil homology domain-containing protein. (378 aa)
	TCAL_04235	V-SNARE coiled-coil homology domain-containing protein. (96 aa)
	TCAL_14423	SH3 domain-containing protein. (169 aa)
	TCAL_09305	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (435 aa)
	TCAL_07584	Uncharacterized protein. (646 aa)
	TCAL_12668	Integrin beta; Belongs to the integrin beta chain family. (809 aa)
	TCAL_11730	Uncharacterized protein. (1054 aa)
	TCAL_05983	GRANULINS domain-containing protein. (209 aa)
	TCAL_11001	CG-1 domain-containing protein. (1689 aa)
	TCAL_01961	Kazal-like domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (611 aa)
	TCAL_12868	Uncharacterized protein; Belongs to the CD36 family. (906 aa)
	TCAL_12986	Uncharacterized protein. (665 aa)
	TCAL_11630	Uncharacterized protein. (1094 aa)
	TCAL_07787	Uncharacterized protein. (411 aa)
	TCAL_11628	Uncharacterized protein; Belongs to the peptidase C1 family. (369 aa)
	TCAL_10369	Uncharacterized protein. (2129 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_00212	TCAL_00470	A0A553P3I5	A0A553NB20	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.587
TCAL_00212	TCAL_00471	A0A553P3I5	A0A553NAX8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.586
TCAL_00212	TCAL_01129	A0A553P3I5	A0A553P2W1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_01168	A0A553P3I5	A0A553NY47	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_01258	A0A553P3I5	A0A553NZT3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the tubulin family.	0.788
TCAL_00212	TCAL_01298	A0A553P3I5	A0A553N6E9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.585
TCAL_00212	TCAL_01299	A0A553P3I5	A0A553PDN3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.583
TCAL_00212	TCAL_01618	A0A553P3I5	A0A553P9S5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.408
TCAL_00212	TCAL_02090	A0A553P3I5	A0A553NDG0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.594
TCAL_00212	TCAL_02844	A0A553P3I5	A0A553NZD2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.783
TCAL_00212	TCAL_02950	A0A553P3I5	A0A553NNZ6	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_03823	A0A553P3I5	A0A553NS48	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the actin family.	0.589
TCAL_00212	TCAL_03966	A0A553P3I5	A0A553P3Z1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_03967	A0A553P3I5	A0A553P2C3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_03968	A0A553P3I5	A0A553P3A1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_04033	A0A553P3I5	A0A553PHH9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.786
TCAL_00212	TCAL_04525	A0A553P3I5	A0A553PD03	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.481
TCAL_00212	TCAL_05284	A0A553P3I5	A0A553NX47	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.757
TCAL_00212	TCAL_05666	A0A553P3I5	A0A553PAV9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	WD_REPEATS_REGION domain-containing protein.	0.584
TCAL_00212	TCAL_07699	A0A553P3I5	A0A553NET1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the actin family.	0.594