17 items (Tigriopus californicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCAL_16954	Recep_L_domain domain-containing protein. (101 aa)
	TCAL_16955	Uncharacterized protein. (187 aa)
	TCAL_02313	Uncharacterized protein. (987 aa)
	TCAL_12076	Uncharacterized protein. (1136 aa)
	TCAL_04546	cGMP-dependent protein kinase. (711 aa)
	TCAL_09701	Uncharacterized protein. (1702 aa)
	TCAL_01166	ANK_REP_REGION domain-containing protein. (567 aa)
	TCAL_01086	Fork-head domain-containing protein. (418 aa)
	TCAL_14888	Uncharacterized protein. (421 aa)
	TCAL_08800	Ion_trans_2 domain-containing protein. (404 aa)
	TCAL_11683	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (88 aa)
	TCAL_11866	Uncharacterized protein; Belongs to the small heat shock protein (HSP20) family. (263 aa)
	TCAL_14745	Fork-head domain-containing protein. (436 aa)
	TCAL_03537	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (389 aa)
	TCAL_04037	Uncharacterized protein. (1122 aa)
	TCAL_09780	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (383 aa)
	TCAL_17392	Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (495 aa)

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCAL_02313	TCAL_04037	A0A553NNN4	A0A553PHI2	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_02313	TCAL_14745	A0A553NNN4	A0A553PER4	Uncharacterized protein.	Fork-head domain-containing protein.	0.537
TCAL_04037	TCAL_02313	A0A553PHI2	A0A553NNN4	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_04037	TCAL_09701	A0A553PHI2	A0A553NPD9	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_04037	TCAL_16954	A0A553PHI2	A0A553NP95	Uncharacterized protein.	Recep_L_domain domain-containing protein.	0.913
TCAL_04037	TCAL_16955	A0A553PHI2	A0A553NP27	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_04546	TCAL_14745	A0A553PTT8	A0A553PER4	cGMP-dependent protein kinase.	Fork-head domain-containing protein.	0.541
TCAL_09701	TCAL_04037	A0A553NPD9	A0A553PHI2	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_09701	TCAL_14745	A0A553NPD9	A0A553PER4	Uncharacterized protein.	Fork-head domain-containing protein.	0.537
TCAL_12076	TCAL_14745	A0A553PT59	A0A553PER4	Uncharacterized protein.	Fork-head domain-containing protein.	0.541
TCAL_14745	TCAL_02313	A0A553PER4	A0A553NNN4	Fork-head domain-containing protein.	Uncharacterized protein.	0.537
TCAL_14745	TCAL_04546	A0A553PER4	A0A553PTT8	Fork-head domain-containing protein.	cGMP-dependent protein kinase.	0.541
TCAL_14745	TCAL_09701	A0A553PER4	A0A553NPD9	Fork-head domain-containing protein.	Uncharacterized protein.	0.537
TCAL_14745	TCAL_12076	A0A553PER4	A0A553PT59	Fork-head domain-containing protein.	Uncharacterized protein.	0.541
TCAL_14745	TCAL_16954	A0A553PER4	A0A553NP95	Fork-head domain-containing protein.	Recep_L_domain domain-containing protein.	0.537
TCAL_14745	TCAL_16955	A0A553PER4	A0A553NP27	Fork-head domain-containing protein.	Uncharacterized protein.	0.537
TCAL_16954	TCAL_04037	A0A553NP95	A0A553PHI2	Recep_L_domain domain-containing protein.	Uncharacterized protein.	0.913
TCAL_16954	TCAL_14745	A0A553NP95	A0A553PER4	Recep_L_domain domain-containing protein.	Fork-head domain-containing protein.	0.537
TCAL_16955	TCAL_04037	A0A553NP27	A0A553PHI2	Uncharacterized protein.	Uncharacterized protein.	0.913
TCAL_16955	TCAL_14745	A0A553NP27	A0A553PER4	Uncharacterized protein.	Fork-head domain-containing protein.	0.537