STRINGSTRING
hemL hemL SCL46971.1 SCL46971.1 SCL46977.1 SCL46977.1 SCL46989.1 SCL46989.1 SCL46993.1 SCL46993.1 SCL46996.1 SCL46996.1 SCL49275.1 SCL49275.1 SCL49279.1 SCL49279.1 SCL49283.1 SCL49283.1 hemE hemE SCL52148.1 SCL52148.1 SCL52151.1 SCL52151.1 SCL52698.1 SCL52698.1 SCL52701.1 SCL52701.1 SCL52705.1 SCL52705.1 SCL52707.1 SCL52707.1 SCL55394.1 SCL55394.1 SCL55396.1 SCL55396.1 SCL55400.1 SCL55400.1 SCL56281.1 SCL56281.1 SCL56283.1 SCL56283.1 SCL56288.1 SCL56288.1 hemH hemH SCL59173.1 SCL59173.1 SCL59882.1 SCL59882.1 SCL59934.1 SCL59934.1 SCL59937.1 SCL59937.1 SCL59939.1 SCL59939.1 SCL59943.1 SCL59943.1 cobS cobS SCL59950.1 SCL59950.1 SCL60017.1 SCL60017.1 SCL61591.1 SCL61591.1 cobT cobT SCL61599.1 SCL61599.1 SCL61607.1 SCL61607.1 cobQ cobQ cobD cobD SCL62048.1 SCL62048.1 SCL62472.1 SCL62472.1 cysH cysH SCL62479.1 SCL62479.1 SCL62482.1 SCL62482.1 SCL62916.1 SCL62916.1 SCL63106.1 SCL63106.1 SCL63110.1 SCL63110.1 SCL63214.1 SCL63214.1 SCL63216.1 SCL63216.1 SCL63221.1 SCL63221.1 SCL63224.1 SCL63224.1 SCL63229.1 SCL63229.1 SCL63233.1 SCL63233.1 SCL63235.1 SCL63235.1 SCL63239.1 SCL63239.1 SCL63243.1 SCL63243.1 SCL63871.1 SCL63871.1 SCL63877.1 SCL63877.1 hemC hemC hemA hemA rex rex SCL63897.1 SCL63897.1 SCL65022.1 SCL65022.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hemLGlutamate-1-semialdehyde 2,1-aminomutase. (443 aa)
SCL46971.1Broad specificity phosphatase PhoE. (215 aa)
SCL46977.1Thiol-disulfide isomerase or thioredoxin. (192 aa)
SCL46989.1Cytochrome c-type biogenesis protein. (331 aa)
SCL46993.1Cytochrome c biogenesis protein. (566 aa)
SCL46996.1Cytochrome c-type biogenesis protein CcsB. (329 aa)
SCL49275.13'(2'),5'-bisphosphate nucleotidase. (274 aa)
SCL49279.1Sulfate adenylyltransferase subunit 2. (303 aa)
SCL49283.1Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (444 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (368 aa)
SCL52148.1Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (470 aa)
SCL52151.1Chlorite dismutase. (233 aa)
SCL52698.1Xylulokinase. (530 aa)
SCL52701.1Hypothetical protein. (770 aa)
SCL52705.1PucR C-terminal helix-turn-helix domain-containing protein. (399 aa)
SCL52707.1Glucose/arabinose dehydrogenase, beta-propeller fold. (498 aa)
SCL55394.1Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (435 aa)
SCL55396.1Sulfate adenylyltransferase subunit 2. (304 aa)
SCL55400.13'(2'),5'-bisphosphate nucleotidase. (291 aa)
SCL56281.1Hypothetical protein. (229 aa)
SCL56283.1NAD(P)H-flavin reductase; Belongs to the globin family. (391 aa)
SCL56288.1Hemoglobin. (132 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (345 aa)
SCL59173.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (157 aa)
SCL59882.1Putative copper resistance protein D. (307 aa)
SCL59934.1Zn-dependent protease (includes SpoIVFB). (265 aa)
SCL59937.1Hypothetical protein. (66 aa)
SCL59939.1Hypothetical protein. (64 aa)
SCL59943.1Adenosylcobinamide kinase. (728 aa)
cobSCobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (257 aa)
SCL59950.1Hypothetical protein. (429 aa)
SCL60017.1UDP-galactopyranose mutase. (500 aa)
SCL61591.1uroporphyrinogen-III C-methyltransferase. (424 aa)
cobTNicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (357 aa)
SCL61599.1L-threonine O-3-phosphate decarboxylase. (391 aa)
SCL61607.1Cobyrinic acid a,c-diamide synthase. (480 aa)
cobQAdenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (538 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (347 aa)
SCL62048.1ATP:cob(I)alamin adenosyltransferase; Manually curated; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa)
SCL62472.1Sirohydrochlorin ferrochelatase. (235 aa)
cysHPhosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. (248 aa)
SCL62479.1Hypothetical protein. (52 aa)
SCL62482.1Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (570 aa)
SCL62916.1Sulfate adenylyltransferase. (509 aa)
SCL63106.1Methyltransferase domain-containing protein. (446 aa)
SCL63110.1Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (157 aa)
SCL63214.1MFS transporter, NNP family, nitrate/nitrite transporter. (458 aa)
SCL63216.1mRNA interferase MazF. (97 aa)
SCL63221.1Hypothetical protein. (85 aa)
SCL63224.1tRNA (cmo5U34)-methyltransferase. (231 aa)
SCL63229.1Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (715 aa)
SCL63233.1Assimilatory nitrate reductase (NADH) beta subunit. (522 aa)
SCL63235.1Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (844 aa)
SCL63239.1Assimilatory nitrite reductase (NAD(P)H) small subunit. (115 aa)
SCL63243.1uroporphyrinogen-III synthase. (362 aa)
SCL63871.1Porphobilinogen synthase; Belongs to the ALAD family. (327 aa)
SCL63877.1uroporphyrinogen-III C-methyltransferase. (526 aa)
hemCHydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (322 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (458 aa)
rexRedox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (256 aa)
SCL63897.1Glutaredoxin. (84 aa)
SCL65022.1Adenosylcobinamide amidohydrolase. (280 aa)
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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