STRINGSTRING
SCL46225.1 SCL46225.1 selD selD SCL46027.1 SCL46027.1 SCL46025.1 SCL46025.1 selA selA SCL56929.1 SCL56929.1 SCL59033.1 SCL59033.1 SCL59293.1 SCL59293.1 SCL61957.1 SCL61957.1 SCL62916.1 SCL62916.1 metG metG SCL49279.1 SCL49279.1 SCL49283.1 SCL49283.1 SCL49866.1 SCL49866.1 SCL51015.1 SCL51015.1 SCL65013.1 SCL65013.1 SCL53659.1 SCL53659.1 metE metE SCL55394.1 SCL55394.1 SCL55396.1 SCL55396.1 SCL51285.1 SCL51285.1 SCL49093.1 SCL49093.1 SCL48618.1 SCL48618.1 SCL48587.1 SCL48587.1 SCL46977.1 SCL46977.1 SCL46438.1 SCL46438.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCL46225.1Cysteine desulfuration protein SufE. (142 aa)
selDSelenophosphate synthase; Synthesizes selenophosphate from selenide and ATP. (329 aa)
SCL46027.1Thioredoxin; Belongs to the thioredoxin family. (107 aa)
SCL46025.1Thioredoxin reductase (NADPH). (316 aa)
selAL-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (429 aa)
SCL56929.1Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1171 aa)
SCL59033.1Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (438 aa)
SCL59293.1Cystathionine gamma-synthase. (386 aa)
SCL61957.1Putative thioredoxin. (307 aa)
SCL62916.1Sulfate adenylyltransferase. (509 aa)
metGmethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (600 aa)
SCL49279.1Sulfate adenylyltransferase subunit 2. (303 aa)
SCL49283.1Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (444 aa)
SCL49866.1Cystathionine gamma-lyase. (380 aa)
SCL51015.1Cobalamin-independent synthase, Catalytic domain. (342 aa)
SCL65013.1Thiol-disulfide isomerase or thioredoxin. (275 aa)
SCL53659.1Selenocysteine lyase/Cysteine desulfurase. (345 aa)
metEMethionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (745 aa)
SCL55394.1Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (435 aa)
SCL55396.1Sulfate adenylyltransferase subunit 2. (304 aa)
SCL51285.1Cystathionine gamma-lyase. (382 aa)
SCL49093.1Thioredoxin; Belongs to the thioredoxin family. (120 aa)
SCL48618.1Thioredoxin reductase (NADPH). (306 aa)
SCL48587.1Hypothetical protein. (115 aa)
SCL46977.1Thiol-disulfide isomerase or thioredoxin. (192 aa)
SCL46438.1Thiol-disulfide isomerase or thioredoxin. (612 aa)
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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