29 items (Wickerhamomyces anomalus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1E3NUR1	Uncharacterized protein. (850 aa)
	A0A1E3NV03	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (412 aa)
	A0A1E3NV30	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (396 aa)
	A0A1E3NVJ9	RING-type domain-containing protein. (106 aa)
	A0A1E3NWC0	Uncharacterized protein. (833 aa)
	A0A1E3NWV6	Uncharacterized protein. (682 aa)
	A0A1E3NX03	CULLIN_2 domain-containing protein; Belongs to the cullin family. (505 aa)
	A0A1E3NXC5	WD_REPEATS_REGION domain-containing protein. (517 aa)
	A0A1E3NZR2	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (174 aa)
	A0A1E3P1A5	WD_REPEATS_REGION domain-containing protein. (345 aa)
	A0A1E3P1H4	HORMA domain-containing protein. (210 aa)
	A0A1E3P1J8	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (103 aa)
	A0A1E3P276	Uncharacterized protein. (678 aa)
	A0A1E3P2W5	WD_REPEATS_REGION domain-containing protein. (497 aa)
	A0A1E3P344	Uncharacterized protein. (776 aa)
	A0A1E3P387	RTC4 domain-containing protein. (487 aa)
	A0A1E3P3L5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (329 aa)
	A0A1E3P3X0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (191 aa)
	A0A1E3P4L4	TPR_REGION domain-containing protein. (507 aa)
	A0A1E3P735	Uncharacterized protein. (1505 aa)
	A0A1E3P7G6	Serine/threonine-protein kinase. (664 aa)
	A0A1E3P8H2	Uncharacterized protein. (645 aa)
	A0A1E3P8I6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (315 aa)
	A0A1E3P8M9	Uncharacterized protein. (350 aa)
	A0A1E3P8Z0	Uncharacterized protein. (431 aa)
	A0A1E3P961	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (325 aa)
	A0A1E3PAU9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (357 aa)
	A0A1E3PAZ4	Uncharacterized protein. (663 aa)
	A0A1E3PCT2	Protein kinase domain-containing protein. (654 aa)

Your Current Organism:

Wickerhamomyces anomalus

NCBI taxonomy Id: 683960
Other names: Pichia anomala NRRL Y-366-8, W. anomalus NRRL Y-366-8, Wickerhamomyces anomalus NRRL Y-366-8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3NUR1	A0A1E3NV03	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.812
A0A1E3NUR1	A0A1E3NV30	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.812
A0A1E3NUR1	A0A1E3NWC0	Uncharacterized protein.	Uncharacterized protein.	0.853
A0A1E3NUR1	A0A1E3NXC5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.631
A0A1E3NUR1	A0A1E3P1A5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.631
A0A1E3NUR1	A0A1E3P1H4	Uncharacterized protein.	HORMA domain-containing protein.	0.877
A0A1E3NUR1	A0A1E3P276	Uncharacterized protein.	Uncharacterized protein.	0.462
A0A1E3NUR1	A0A1E3P2W5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.654
A0A1E3NUR1	A0A1E3P3L5	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.795
A0A1E3NUR1	A0A1E3P7G6	Uncharacterized protein.	Serine/threonine-protein kinase.	0.882
A0A1E3NUR1	A0A1E3P8I6	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.717
A0A1E3NUR1	A0A1E3P8M9	Uncharacterized protein.	Uncharacterized protein.	0.788
A0A1E3NUR1	A0A1E3P961	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.739
A0A1E3NUR1	A0A1E3PAU9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.717
A0A1E3NUR1	A0A1E3PCT2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.932
A0A1E3NV03	A0A1E3NUR1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.812
A0A1E3NV03	A0A1E3NVJ9	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	RING-type domain-containing protein.	0.926
A0A1E3NV03	A0A1E3NWC0	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.886
A0A1E3NV03	A0A1E3NWV6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.970
A0A1E3NV03	A0A1E3NX03	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.932