(16 nodes) RSC-type complex, and SWI/SNF complex network (Wickerhamomyces anomalus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1E3NU89	Uncharacterized protein; Belongs to the actin family. (434 aa)
	A0A1E3NVM1	Uncharacterized protein. (530 aa)
	A0A1E3NWD3	Uncharacterized protein. (670 aa)
	A0A1E3NZY3	Uncharacterized protein. (498 aa)
	A0A1E3P0X3	Uncharacterized protein. (1221 aa)
	A0A1E3P1G0	Uncharacterized protein. (336 aa)
	A0A1E3P1X0	Uncharacterized protein. (554 aa)
	A0A1E3P200	Uncharacterized protein. (505 aa)
	A0A1E3P3H0	Uncharacterized protein. (546 aa)
	A0A1E3P428	Uncharacterized protein; Belongs to the actin family. (382 aa)
	A0A1E3P4T8	Uncharacterized protein. (1531 aa)
	A0A1E3P6R8	SWIB domain-containing protein. (398 aa)
	A0A1E3P761	Uncharacterized protein. (494 aa)
	A0A1E3P7W2	Uncharacterized protein. (458 aa)
	A0A1E3P9L2	Uncharacterized protein. (534 aa)
	A0A1E3PBQ3	ARID domain-containing protein. (1307 aa)

Your Current Organism:

Wickerhamomyces anomalus

NCBI taxonomy Id: 683960
Other names: Pichia anomala NRRL Y-366-8, W. anomalus NRRL Y-366-8, Wickerhamomyces anomalus NRRL Y-366-8

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3NU89	A0A1E3NVM1	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.950
A0A1E3NU89	A0A1E3NWD3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.966
A0A1E3NU89	A0A1E3NZY3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.947
A0A1E3NU89	A0A1E3P0X3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.963
A0A1E3NU89	A0A1E3P1G0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.961
A0A1E3NU89	A0A1E3P1X0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.960
A0A1E3NU89	A0A1E3P200	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.937
A0A1E3NU89	A0A1E3P3H0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.954
A0A1E3NU89	A0A1E3P428	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.979
A0A1E3NU89	A0A1E3P4T8	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.970
A0A1E3NU89	A0A1E3P6R8	Uncharacterized protein; Belongs to the actin family.	SWIB domain-containing protein.	0.874
A0A1E3NU89	A0A1E3P761	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.970
A0A1E3NU89	A0A1E3P7W2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.928
A0A1E3NU89	A0A1E3P9L2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.943
A0A1E3NU89	A0A1E3PBQ3	Uncharacterized protein; Belongs to the actin family.	ARID domain-containing protein.	0.940
A0A1E3NVM1	A0A1E3NU89	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.950
A0A1E3NVM1	A0A1E3NWD3	Uncharacterized protein.	Uncharacterized protein.	0.933
A0A1E3NVM1	A0A1E3NZY3	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A1E3NVM1	A0A1E3P0X3	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A1E3NVM1	A0A1E3P1G0	Uncharacterized protein.	Uncharacterized protein.	0.962