(12 nodes) SAGA-type complex network (Wickerhamomyces anomalus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1E3PCA3	Bromo domain-containing protein. (1051 aa)
	A0A1E3NUS2	Uncharacterized protein. (968 aa)
	A0A1E3NYX2	Uncharacterized protein. (465 aa)
	A0A1E3NZK5	SCA7 domain-containing protein. (50 aa)
	A0A1E3P1U1	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (430 aa)
	A0A1E3P3Z8	Uncharacterized protein. (317 aa)
	A0A1E3P5H0	Uncharacterized protein. (485 aa)
	A0A1E3P6H0	SGF29 C-terminal domain-containing protein. (235 aa)
	A0A1E3P7L8	Uncharacterized protein. (632 aa)
	A0A1E3P9D4	Ubiquitin carboxyl-terminal hydrolase. (513 aa)
	A0A1E3PBY3	Uncharacterized protein. (490 aa)
	A0A1E3PCZ9	Uncharacterized protein. (1414 aa)

Your Current Organism:

Wickerhamomyces anomalus

NCBI taxonomy Id: 683960
Other names: Pichia anomala NRRL Y-366-8, W. anomalus NRRL Y-366-8, Wickerhamomyces anomalus NRRL Y-366-8

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3NUS2	A0A1E3NZK5	Uncharacterized protein.	SCA7 domain-containing protein.	0.593
A0A1E3NUS2	A0A1E3P1U1	Uncharacterized protein.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.654
A0A1E3NUS2	A0A1E3P3Z8	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A1E3NUS2	A0A1E3P6H0	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.868
A0A1E3NUS2	A0A1E3P7L8	Uncharacterized protein.	Uncharacterized protein.	0.873
A0A1E3NUS2	A0A1E3P9D4	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.504
A0A1E3NUS2	A0A1E3PCA3	Uncharacterized protein.	Bromo domain-containing protein.	0.500
A0A1E3NYX2	A0A1E3NZK5	Uncharacterized protein.	SCA7 domain-containing protein.	0.997
A0A1E3NYX2	A0A1E3P1U1	Uncharacterized protein.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.961
A0A1E3NYX2	A0A1E3P3Z8	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1E3NYX2	A0A1E3P5H0	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A1E3NYX2	A0A1E3P6H0	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.977
A0A1E3NYX2	A0A1E3P7L8	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A1E3NYX2	A0A1E3P9D4	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.965
A0A1E3NYX2	A0A1E3PBY3	Uncharacterized protein.	Uncharacterized protein.	0.671
A0A1E3NYX2	A0A1E3PCA3	Uncharacterized protein.	Bromo domain-containing protein.	0.996
A0A1E3NYX2	A0A1E3PCZ9	Uncharacterized protein.	Uncharacterized protein.	0.670
A0A1E3NZK5	A0A1E3NUS2	SCA7 domain-containing protein.	Uncharacterized protein.	0.593
A0A1E3NZK5	A0A1E3NYX2	SCA7 domain-containing protein.	Uncharacterized protein.	0.997
A0A1E3NZK5	A0A1E3P1U1	SCA7 domain-containing protein.	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.	0.983