(12 nodes) Intraciliary transport particle B network (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4NUB6_BATDJ	Uncharacterized protein. (470 aa)
	F4NVB2_BATDJ	IFT81_CH domain-containing protein. (721 aa)
	F4NZ67_BATDJ	WD_REPEATS_REGION domain-containing protein. (766 aa)
	F4P1Z5_BATDJ	Uncharacterized protein. (436 aa)
	F4P3M4_BATDJ	Uncharacterized protein. (1684 aa)
	F4P424_BATDJ	Uncharacterized protein. (490 aa)
	F4P4I6_BATDJ	Uncharacterized protein. (522 aa)
	F4P5X4_BATDJ	Uncharacterized protein. (159 aa)
	F4P743_BATDJ	Uncharacterized protein. (672 aa)
	F4P923_BATDJ	Uncharacterized protein. (709 aa)
	F4PE37_BATDJ	TPR_REGION domain-containing protein. (546 aa)
	F4PEA0_BATDJ	Uncharacterized protein. (579 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NUB6_BATDJ	F4NVB2_BATDJ	F4NUB6	F4NVB2	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.996
F4NUB6_BATDJ	F4NZ67_BATDJ	F4NUB6	F4NZ67	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995
F4NUB6_BATDJ	F4P1Z5_BATDJ	F4NUB6	F4P1Z5	Uncharacterized protein.	Uncharacterized protein.	0.996
F4NUB6_BATDJ	F4P3M4_BATDJ	F4NUB6	F4P3M4	Uncharacterized protein.	Uncharacterized protein.	0.989
F4NUB6_BATDJ	F4P424_BATDJ	F4NUB6	F4P424	Uncharacterized protein.	Uncharacterized protein.	0.996
F4NUB6_BATDJ	F4P4I6_BATDJ	F4NUB6	F4P4I6	Uncharacterized protein.	Uncharacterized protein.	0.989
F4NUB6_BATDJ	F4P5X4_BATDJ	F4NUB6	F4P5X4	Uncharacterized protein.	Uncharacterized protein.	0.969
F4NUB6_BATDJ	F4P743_BATDJ	F4NUB6	F4P743	Uncharacterized protein.	Uncharacterized protein.	0.993
F4NUB6_BATDJ	F4P923_BATDJ	F4NUB6	F4P923	Uncharacterized protein.	Uncharacterized protein.	0.995
F4NUB6_BATDJ	F4PE37_BATDJ	F4NUB6	F4PE37	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.995
F4NUB6_BATDJ	F4PEA0_BATDJ	F4NUB6	F4PEA0	Uncharacterized protein.	Uncharacterized protein.	0.995
F4NVB2_BATDJ	F4NUB6_BATDJ	F4NVB2	F4NUB6	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.996
F4NVB2_BATDJ	F4NZ67_BATDJ	F4NVB2	F4NZ67	IFT81_CH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.993
F4NVB2_BATDJ	F4P1Z5_BATDJ	F4NVB2	F4P1Z5	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.997
F4NVB2_BATDJ	F4P3M4_BATDJ	F4NVB2	F4P3M4	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.991
F4NVB2_BATDJ	F4P424_BATDJ	F4NVB2	F4P424	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.992
F4NVB2_BATDJ	F4P4I6_BATDJ	F4NVB2	F4P4I6	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.994
F4NVB2_BATDJ	F4P5X4_BATDJ	F4NVB2	F4P5X4	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.992
F4NVB2_BATDJ	F4P743_BATDJ	F4NVB2	F4P743	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.991
F4NVB2_BATDJ	F4P923_BATDJ	F4NVB2	F4P923	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.992