10 items (Batrachochytrium dendrobatidis JAM81)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4P887_BATDJ	Uncharacterized protein. (203 aa)
	F4NUY3_BATDJ	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (993 aa)
	F4NXY1_BATDJ	Uncharacterized protein. (1504 aa)
	F4NZI0_BATDJ	Uncharacterized protein. (1187 aa)
	F4NZI1_BATDJ	Uncharacterized protein. (654 aa)
	F4P089_BATDJ	Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1028 aa)
	F4P1T6_BATDJ	Uncharacterized protein. (1690 aa)
	F4P2U9_BATDJ	Uncharacterized protein. (684 aa)
	F4PF61_BATDJ	Uncharacterized protein. (294 aa)
	F4P4E5_BATDJ	Uncharacterized protein. (1855 aa)

Your Current Organism:

Batrachochytrium dendrobatidis JAM81

NCBI taxonomy Id: 684364
Other names: B. dendrobatidis JAM81

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4NXY1_BATDJ	F4NZI0_BATDJ	F4NXY1	F4NZI0	Uncharacterized protein.	Uncharacterized protein.	0.654
F4NXY1_BATDJ	F4NZI1_BATDJ	F4NXY1	F4NZI1	Uncharacterized protein.	Uncharacterized protein.	0.654
F4NXY1_BATDJ	F4P4E5_BATDJ	F4NXY1	F4P4E5	Uncharacterized protein.	Uncharacterized protein.	0.654
F4NZI0_BATDJ	F4NXY1_BATDJ	F4NZI0	F4NXY1	Uncharacterized protein.	Uncharacterized protein.	0.654
F4NZI0_BATDJ	F4NZI1_BATDJ	F4NZI0	F4NZI1	Uncharacterized protein.	Uncharacterized protein.	0.695
F4NZI1_BATDJ	F4NXY1_BATDJ	F4NZI1	F4NXY1	Uncharacterized protein.	Uncharacterized protein.	0.654
F4NZI1_BATDJ	F4NZI0_BATDJ	F4NZI1	F4NZI0	Uncharacterized protein.	Uncharacterized protein.	0.695
F4P4E5_BATDJ	F4NXY1_BATDJ	F4P4E5	F4NXY1	Uncharacterized protein.	Uncharacterized protein.	0.654